Entry Database : PDB / ID : 2va7 Structure visualization Downloads & linksTitle X-ray crystal structure of beta secretase complexed with compound 27 ComponentsBETA-SECRETASE 1 . Details Keywords HYDROLASE / BASE / ZYMOGEN / PROTEASE / MEMBRANE / ALZHEIMER'S DISEASE / ALTERNATIVE SPLICING / MEMAPSIN 2 / GLYCOPROTEIN / TRANSMEMBRANE / BETA-SECRETASE / ASPARTYL PROTEASE / ASPARTIC PROTEASEFunction / homology Function and homology informationFunction Domain/homology Component
memapsin 2 / Golgi-associated vesicle lumen / signaling receptor ligand precursor processing / beta-aspartyl-peptidase activity / amyloid precursor protein catabolic process / amyloid-beta formation / membrane protein ectodomain proteolysis / cellular response to manganese ion / amyloid-beta metabolic process / prepulse inhibition ... memapsin 2 / Golgi-associated vesicle lumen / signaling receptor ligand precursor processing / beta-aspartyl-peptidase activity / amyloid precursor protein catabolic process / amyloid-beta formation / membrane protein ectodomain proteolysis / cellular response to manganese ion / amyloid-beta metabolic process / prepulse inhibition / detection of mechanical stimulus involved in sensory perception of pain / protein serine/threonine kinase binding / cellular response to copper ion / presynaptic modulation of chemical synaptic transmission / hippocampal mossy fiber to CA3 synapse / multivesicular body / response to lead ion / trans-Golgi network / recycling endosome / protein processing / cellular response to amyloid-beta / positive regulation of neuron apoptotic process / synaptic vesicle / late endosome / peptidase activity / amyloid-beta binding / endopeptidase activity / amyloid fibril formation / aspartic-type endopeptidase activity / lysosome / early endosome / endosome membrane / endosome / membrane raft / Amyloid fiber formation / endoplasmic reticulum lumen / axon / neuronal cell body / dendrite / Golgi apparatus / enzyme binding / cell surface / proteolysis / membrane / plasma membrane Similarity search - Function Beta-secretase BACE1 / Beta-secretase BACE / Memapsin-like / Eukaryotic aspartyl protease / Aspartic peptidase A1 family / Peptidase family A1 domain / Peptidase family A1 domain profile. / Cathepsin D, subunit A; domain 1 / Acid Proteases / Aspartic peptidase, active site ... Beta-secretase BACE1 / Beta-secretase BACE / Memapsin-like / Eukaryotic aspartyl protease / Aspartic peptidase A1 family / Peptidase family A1 domain / Peptidase family A1 domain profile. / Cathepsin D, subunit A; domain 1 / Acid Proteases / Aspartic peptidase, active site / Eukaryotic and viral aspartyl proteases active site. / Aspartic peptidase domain superfamily / Beta Barrel / Mainly Beta Similarity search - Domain/homologyBiological species HOMO SAPIENS (human)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 2.2 Å DetailsAuthors Edwards, P.D. / Albert, J.S. / Sylvester, M. / Aharony, D. / Andisik, D. / Callaghan, O. / Campbell, J.B. / Carr, R.A. / Chessari, G. / Congreve, M. ...Edwards, P.D. / Albert, J.S. / Sylvester, M. / Aharony, D. / Andisik, D. / Callaghan, O. / Campbell, J.B. / Carr, R.A. / Chessari, G. / Congreve, M. / Frederickson, M. / Folmer, R.H.A. / Geschwindner, S. / Koether, G. / Kolmodin, K. / Krumrine, J. / Mauger, R.C. / Murray, C.W. / Olsson, L.L. / Patel, S. / Spear, N. / Tian, G. CitationJournal : J.Med.Chem. / Year : 2007Title : Application of Fragment-Based Lead Generation to the Discovery of Novel, Cyclic Amidine Beta-Secretase Inhibitors with Nanomolar Potency, Cellular Activity, and High Ligand Efficiency.Authors: Edwards, P.D. / Albert, J.S. / Sylvester, M. / Aharony, D. / Andisik, D. / Callaghan, O. / Campbell, J.B. / Carr, R.A. / Chessari, G. / Congreve, M. / Frederickson, M. / Folmer, R.H.A. / ... Authors : Edwards, P.D. / Albert, J.S. / Sylvester, M. / Aharony, D. / Andisik, D. / Callaghan, O. / Campbell, J.B. / Carr, R.A. / Chessari, G. / Congreve, M. / Frederickson, M. / Folmer, R.H.A. / Geschwindner, S. / Koether, G. / Kolmodin, K. / Krumrine, J. / Mauger, R.C. / Murray, C.W. / Olsson, L.L. / Patel, S. / Spear, N. / Tian, G. History Deposition Aug 30, 2007 Deposition site : PDBE / Processing site : PDBERevision 1.0 Nov 13, 2007 Provider : repository / Type : Initial releaseRevision 1.1 May 8, 2011 Group : Version format complianceRevision 1.2 Jul 13, 2011 Group : Version format complianceRevision 1.3 Dec 13, 2023 Group : Data collection / Database references ... Data collection / Database references / Other / Refinement description Category : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_database_status / pdbx_initial_refinement_model Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.status_code_sf
Show all Show less Remark 700 SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN ... SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED.