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- PDB-2pcf: THE COMPLEX OF CYTOCHROME F AND PLASTOCYANIN DETERMINED WITH PARA... -
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Open data
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Basic information
Entry | Database: PDB / ID: 2pcf | ||||||
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Title | THE COMPLEX OF CYTOCHROME F AND PLASTOCYANIN DETERMINED WITH PARAMAGNETIC NMR. BASED ON THE STRUCTURES OF CYTOCHROME F AND PLASTOCYANIN, 10 STRUCTURES | ||||||
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![]() | COMPLEX (ELECTRON TRANSPORT PROTEINS) / ELECTRON TRANSPORT / PARAMAGNETIC / CHEMICAL SHIFT / COMPLEX FORMATION / DYNAMIC COMPLEX / PHOTOSYNTHESIS / PSEUDOCONTACT SHIFT | ||||||
Function / homology | ![]() electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity / chloroplast thylakoid lumen / chloroplast thylakoid membrane / photosynthesis / electron transfer activity / iron ion binding / copper ion binding / heme binding Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | SOLUTION NMR / DYNAMICS | ||||||
![]() | Ubbink, M. / Ejdeback, M. / Karlsson, B.G. / Bendall, D.S. | ||||||
![]() | ![]() Title: The structure of the complex of plastocyanin and cytochrome f, determined by paramagnetic NMR and restrained rigid-body molecular dynamics. Authors: Ubbink, M. / Ejdeback, M. / Karlsson, B.G. / Bendall, D.S. #1: ![]() Title: Effects of Codon Usage and Vector-Host Combinations on the Expression of Spinach Plastocyanin in Escherichia Coli Authors: Ejdeback, M. / Young, S. / Samuelsson, A. / Karlsson, B.G. #2: ![]() Title: Crystal Structure of Chloroplast Cytochrome F Reveals a Novel Cytochrome Fold and Unexpected Heme Ligation Authors: Martinez, S.E. / Huang, D. / Szczepaniak, A. / Cramer, W.A. / Smith, J.L. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 1 MB | Display | ![]() |
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PDB format | ![]() | 920.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 477.7 KB | Display | ![]() |
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Full document | ![]() | 614.1 KB | Display | |
Data in XML | ![]() | 78.8 KB | Display | |
Data in CIF | ![]() | 102.5 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 |
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NMR ensembles |
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Components
#1: Protein | Mass: 10420.557 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() |
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#2: Protein | Mass: 27318.189 Da / Num. of mol.: 1 / Fragment: SOLUBLE DOMAIN Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() |
#3: Chemical | ChemComp-CU / |
#4: Chemical | ChemComp-HEC / |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR experiment | Type: 15N-![]() |
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Sample preparation
Sample conditions | pH: 6.0 / Temperature: 300 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer |
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Processing
Software |
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NMR software |
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Refinement | Method: DYNAMICS / Software ordinal: 1 Details: REFINEMENT DETAILS CAN BE FOUND BELOW AND IN THE JRNL CITATION ABOVE. | ||||||||||||
NMR ensemble | Conformer selection criteria: REFER TO PUBLICATION / Conformers calculated total number: 9999 / Conformers submitted total number: 10 |