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Open data
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Basic information
Entry | Database: PDB / ID: 2n7p | ||||||
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Title | Solution structure of PDZ domain | ||||||
![]() | Putative uncharacterized protein | ||||||
![]() | TRANSFERASE / PDZ | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
Model details | lowest energy, model1 | ||||||
![]() | Mei, S. | ||||||
![]() | ![]() Title: Solution structure of Q388A3 PDZ domain from Trypanosoma brucei and its interaction with OMP-like peptide Authors: Mei, S. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 694.8 KB | Display | ![]() |
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PDB format | ![]() | 592.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 532.5 KB | Display | ![]() |
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Full document | ![]() | 733.7 KB | Display | |
Data in XML | ![]() | 49 KB | Display | |
Data in CIF | ![]() | 63.9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data | |
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Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 10985.445 Da / Num. of mol.: 1 / Fragment: UNP RESIDUES 1528-1630 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Strain: 927/4 GUTat10.1 / Gene: Tb10.61.1430 / Production host: ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR experiment | Type: 2D 1H-15N ![]() |
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Sample preparation
Details | Contents: 100 mM sodium chloride-1, 90% H2O/10% D2O / Solvent system: 90% H2O/10% D2O |
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Sample | Conc.: 100 mM / Component: sodium chloride-1 |
Sample conditions | Ionic strength: 0.1 / pH: 6.5 / Pressure: ambient / Temperature: 20 K |
-NMR measurement
NMR spectrometer | Type: Bruker DMX / Manufacturer: Bruker / Model: DMX / Field strength: 600 MHz |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 | |||||||||
NMR representative | Selection criteria: lowest energy | |||||||||
NMR ensemble | Conformer selection criteria: target function / Conformers calculated total number: 500 / Conformers submitted total number: 20 / Representative conformer: 1 |