+Open data
-Basic information
Entry | Database: PDB / ID: 2cpo | ||||||||||||
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Title | CHLOROPEROXIDASE | ||||||||||||
Components | CHLOROPEROXIDASE | ||||||||||||
Keywords | OXIDOREDUCTASE / CHLORIDE: HYDROGEN-PEROXIDE OXIDOREDUCTASE / HEME PEROXIDASE / HALOPEROXIDASE | ||||||||||||
Function / homology | Function and homology information | ||||||||||||
Biological species | Leptoxyphium fumago (fungus) | ||||||||||||
Method | X-RAY DIFFRACTION / Resolution: 2.1 Å | ||||||||||||
Authors | Sundaramoorthy, M. / Poulos, T.L. | ||||||||||||
Citation | Journal: Structure / Year: 1995 Title: The crystal structure of chloroperoxidase: a heme peroxidase--cytochrome P450 functional hybrid. Authors: Sundaramoorthy, M. / Terner, J. / Poulos, T.L. #1: Journal: Acta Crystallogr.,Sect.D / Year: 1995 Title: Preliminary Crystallographic Analysis of Chloroperoxidase from Caldariomyces Fumago Authors: Sundaramoorthy, M. / Mauro, J.M. / Sullivan, A.M. / Terner, J. / Poulos, T.L. | ||||||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2cpo.cif.gz | 77.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2cpo.ent.gz | 60.1 KB | Display | PDB format |
PDBx/mmJSON format | 2cpo.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/cp/2cpo ftp://data.pdbj.org/pub/pdb/validation_reports/cp/2cpo | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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-Components
-Protein , 1 types, 1 molecules A
#1: Protein | Mass: 32746.885 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Leptoxyphium fumago (fungus) / References: UniProt: P04963, chloride peroxidase |
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-Sugars , 3 types, 11 molecules
#2: Polysaccharide | Source method: isolated from a genetically manipulated source #3: Sugar | ChemComp-NAG / | #4: Sugar | ChemComp-MAN / |
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-Non-polymers , 3 types, 174 molecules
#5: Chemical | ChemComp-MN / |
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#6: Chemical | ChemComp-HEM / |
#7: Water | ChemComp-HOH / |
-Details
Sequence details | THE SEQUENCE OF CARBOHYDRATES IS NOT KNOWN AND HENCE THE SUGARS WERE MODELED BASED ON THE SIZE AND ...THE SEQUENCE OF CARBOHYDRA |
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-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 3.47 Å3/Da / Density % sol: 64.59 % | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Crystal grow | *PLUS Method: vapor diffusion, hanging dropDetails: Sundaramoorthy, M., (1995) Acta Crystallogr.,Sect.D, 51, 842. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction source | Wavelength: 1.5418 |
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Detector | Type: SIEMENS / Date: Mar 7, 1994 |
Radiation | Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Num. obs: 26864 / % possible obs: 98 % / Observed criterion σ(I): 1.13 |
-Processing
Software |
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Refinement | Resolution: 2.1→8 Å / σ(F): 2
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Refine analyze | Luzzati coordinate error obs: 0.2 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.1→8 Å
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Refine LS restraints |
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Software | *PLUS Name: X-PLOR / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Num. reflection all: 25061 / Rfactor all: 0.196 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS |