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Open data
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Basic information
| Entry | Database: PDB / ID: 2c2v | ||||||
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| Title | Crystal structure of the CHIP-UBC13-UEV1a complex | ||||||
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Keywords | CHAPERONE / HEAT-SHOCK PROTEIN COMPLEX / E3 LIGASE / UBIQUITINYLATION / TPR / HEAT-SHOCK PROTEIN | ||||||
| Function / homology | Function and homology informationpositive regulation of chaperone-mediated protein complex assembly / Downregulation of TGF-beta receptor signaling / error-free postreplication DNA repair / regulation of glucocorticoid metabolic process / negative regulation of vascular associated smooth muscle contraction / Downregulation of ERBB2 signaling / UBC13-MMS2 complex / Regulation of TNFR1 signaling / negative regulation of peroxisome proliferator activated receptor signaling pathway / Regulation of PTEN stability and activity ...positive regulation of chaperone-mediated protein complex assembly / Downregulation of TGF-beta receptor signaling / error-free postreplication DNA repair / regulation of glucocorticoid metabolic process / negative regulation of vascular associated smooth muscle contraction / Downregulation of ERBB2 signaling / UBC13-MMS2 complex / Regulation of TNFR1 signaling / negative regulation of peroxisome proliferator activated receptor signaling pathway / Regulation of PTEN stability and activity / Regulation of RUNX2 expression and activity / Regulation of necroptotic cell death / ubiquitin conjugating enzyme complex / positive regulation of ERAD pathway / ubiquitin-protein transferase activator activity / positive regulation of smooth muscle cell apoptotic process / positive regulation of mitophagy / negative regulation of cardiac muscle hypertrophy / positive regulation of protein K63-linked ubiquitination / nuclear inclusion body / DNA double-strand break processing / misfolded protein binding / Antigen processing: Ubiquitination & Proteasome degradation / ubiquitin conjugating enzyme binding / cellular response to misfolded protein / DNA damage tolerance / protein folding chaperone complex / positive regulation of ubiquitin-protein transferase activity / ubiquitin-ubiquitin ligase activity / E2 ubiquitin-conjugating enzyme / positive regulation of double-strand break repair / chaperone-mediated autophagy / TPR domain binding / negative regulation of smooth muscle cell apoptotic process / ubiquitin conjugating enzyme activity / protein quality control for misfolded or incompletely synthesized proteins / R-SMAD binding / positive regulation of intracellular signal transduction / positive regulation of proteolysis / protein K63-linked ubiquitination / protein monoubiquitination / ubiquitin ligase complex / regulation of DNA repair / endoplasmic reticulum unfolded protein response / negative regulation of protein binding / protein autoubiquitination / heat shock protein binding / ERAD pathway / negative regulation of TORC1 signaling / Hsp70 protein binding / antiviral innate immune response / IRAK1 recruits IKK complex / IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation / TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling / positive regulation of DNA repair / TICAM1, RIP1-mediated IKK complex recruitment / JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1 / response to ischemia / IKK complex recruitment mediated by RIP1 / ubiquitin binding / positive regulation of protein ubiquitination / PINK1-PRKN Mediated Mitophagy / activated TAK1 mediates p38 MAPK activation / Hsp90 protein binding / Nonhomologous End-Joining (NHEJ) / negative regulation of transforming growth factor beta receptor signaling pathway / NOD1/2 Signaling Pathway / positive regulation of NF-kappaB transcription factor activity / TAK1-dependent IKK and NF-kappa-B activation / G protein-coupled receptor binding / double-strand break repair via homologous recombination / G2/M DNA damage checkpoint / RING-type E3 ubiquitin transferase / CLEC7A (Dectin-1) signaling / ISG15 antiviral mechanism / FCERI mediated NF-kB activation / kinase binding / Formation of Incision Complex in GG-NER / Z disc / Interleukin-1 signaling / protein polyubiquitination / Aggrephagy / ubiquitin-protein transferase activity / ubiquitin protein ligase activity / Downstream TCR signaling / Antigen processing: Ubiquitination & Proteasome degradation / positive regulation of proteasomal ubiquitin-dependent protein catabolic process / protein folding / T cell receptor signaling pathway / MAPK cascade / E3 ubiquitin ligases ubiquitinate target proteins / Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks / cellular response to heat / Processing of DNA double-strand break ends / ubiquitin-dependent protein catabolic process / protein-macromolecule adaptor activity / cellular response to hypoxia / proteasome-mediated ubiquitin-dependent protein catabolic process / cell differentiation / positive regulation of canonical NF-kappaB signal transduction Similarity search - Function | ||||||
| Biological species | Homo sapiens (human)![]() | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.9 Å | ||||||
Authors | Zhang, M. / Roe, S.M. / Pearl, L.H. | ||||||
Citation | Journal: Mol. Cell / Year: 2005Title: Chaperoned ubiquitylation--crystal structures of the CHIP U box E3 ubiquitin ligase and a CHIP-Ubc13-Uev1a complex. Authors: Zhang, M. / Windheim, M. / Roe, S.M. / Peggie, M. / Cohen, P. / Prodromou, C. / Pearl, L.H. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 2c2v.cif.gz | 294 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb2c2v.ent.gz | 216.9 KB | Display | PDB format |
| PDBx/mmJSON format | 2c2v.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 2c2v_validation.pdf.gz | 540.7 KB | Display | wwPDB validaton report |
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| Full document | 2c2v_full_validation.pdf.gz | 908.3 KB | Display | |
| Data in XML | 2c2v_validation.xml.gz | 95.1 KB | Display | |
| Data in CIF | 2c2v_validation.cif.gz | 121.1 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/c2/2c2v ftp://data.pdbj.org/pub/pdb/validation_reports/c2/2c2v | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 2c2lC ![]() 1jatS S: Starting model for refinement C: citing same article ( |
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| Similar structure data |
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Assembly
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Refine code: 4
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Homo sapiens (human)
X-RAY DIFFRACTION
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