登録情報 | データベース: PDB / ID: 2ba0 |
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タイトル | Archaeal exosome core |
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要素 | - Archaeal exosome RNA binding protein RRP4
- Archaeal exosome RNA binding protein RRP41
- Archaeal exosome RNA binding protein RRP42
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キーワード | RNA BINDING PROTEIN / EXOSOME / RNASE PH / RNA DEGRADATION / EXORIBONUCLEASE / RNA BINDING / S1DOMAIN / KH DOMAIN / ARCHAEAL |
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機能・相同性 | 機能・相同性情報
exosome (RNase complex) / U1 snRNA 3'-end processing / nuclear polyadenylation-dependent mRNA catabolic process / U5 snRNA 3'-end processing / cytoplasmic exosome (RNase complex) / poly(A)-dependent snoRNA 3'-end processing / U4 snRNA 3'-end processing / : / exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / : ...exosome (RNase complex) / U1 snRNA 3'-end processing / nuclear polyadenylation-dependent mRNA catabolic process / U5 snRNA 3'-end processing / cytoplasmic exosome (RNase complex) / poly(A)-dependent snoRNA 3'-end processing / U4 snRNA 3'-end processing / : / exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / : / rRNA catabolic process / poly(A) binding / RNA catabolic process / 加水分解酵素; エステル加水分解酵素; 5'-リン酸モノエステル産生エキソリボヌクレアーゼ / 3'-5'-RNA exonuclease activity / cytoplasm類似検索 - 分子機能 Exosome complex component Rrp4 / Exosome complex component Rrp41 / Exosome complex component Rrp42, archaea / Exosome complex RNA-binding protein 1/RRP40/RRP4 / KH domain / GHMP Kinase, N-terminal domain / K Homology domain, type 1 / Exoribonuclease, phosphorolytic domain 2 / 3' exoribonuclease family, domain 2 / Exoribonuclease, phosphorolytic domain 1 ...Exosome complex component Rrp4 / Exosome complex component Rrp41 / Exosome complex component Rrp42, archaea / Exosome complex RNA-binding protein 1/RRP40/RRP4 / KH domain / GHMP Kinase, N-terminal domain / K Homology domain, type 1 / Exoribonuclease, phosphorolytic domain 2 / 3' exoribonuclease family, domain 2 / Exoribonuclease, phosphorolytic domain 1 / PNPase/RNase PH domain superfamily / Exoribonuclease, PH domain 2 superfamily / 3' exoribonuclease family, domain 1 / KH domain / RNA-binding domain, S1 / K Homology domain, type 1 / RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain / Ribosomal Protein S8; Chain: A, domain 1 / Type-1 KH domain profile. / K Homology domain, type 1 superfamily / Ribosomal Protein S5; domain 2 / S1 domain profile. / Ribosomal protein S1-like RNA-binding domain / S1 RNA binding domain / S1 domain / Nucleic acid-binding proteins / K Homology domain / K homology RNA-binding domain / OB fold (Dihydrolipoamide Acetyltransferase, E2P) / Ribosomal protein S5 domain 2-type fold / Nucleic acid-binding, OB-fold / Beta Barrel / 2-Layer Sandwich / Mainly Beta / Alpha Beta類似検索 - ドメイン・相同性 Exosome complex component Rrp42 / Exosome complex component Rrp41 / Exosome complex component Rrp4類似検索 - 構成要素 |
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生物種 | Archaeoglobus fulgidus (古細菌) |
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手法 | X線回折 / シンクロトロン / 単波長異常分散 / 解像度: 2.7 Å |
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データ登録者 | Buttner, K. / Wenig, K. / Hopfner, K.P. |
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引用 | ジャーナル: Mol.Cell / 年: 2005 タイトル: Structural framework for the mechanism of archaeal exosomes in RNA processing. 著者: Buttner, K. / Wenig, K. / Hopfner, K.P. |
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履歴 | 登録 | 2005年10月13日 | 登録サイト: RCSB / 処理サイト: RCSB |
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改定 1.0 | 2005年11月22日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2008年5月1日 | Group: Version format compliance |
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改定 1.2 | 2011年7月13日 | Group: Version format compliance |
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改定 1.3 | 2017年10月11日 | Group: Advisory / Refinement description カテゴリ: pdbx_unobs_or_zero_occ_atoms / pdbx_unobs_or_zero_occ_residues / software |
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改定 1.4 | 2024年2月14日 | Group: Advisory / Data collection / Database references カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_unobs_or_zero_occ_atoms / pdbx_unobs_or_zero_occ_residues / struct_ref_seq_dif Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details |
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