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Open data
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Basic information
Entry | Database: PDB / ID: 2b7j | ||||||
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Title | Crystal Structure of Yeast Sco1 with Copper Bound | ||||||
![]() | SCO1 protein | ||||||
![]() | METAL BINDING PROTEIN / Metallochaperone / Cytochrome c Oxidase / Sco / Sco1 | ||||||
Function / homology | ![]() copper chaperone activity / mitochondrial cytochrome c oxidase assembly / intracellular copper ion homeostasis / cell redox homeostasis / cellular response to oxidative stress / mitochondrial inner membrane / copper ion binding / mitochondrion Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Abajian, C. / Rosenzweig, A.C. | ||||||
![]() | ![]() Title: Crystal structure of yeast Sco1. Authors: Abajian, C. / Rosenzweig, A.C. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 136.2 KB | Display | ![]() |
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PDB format | ![]() | 107.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 2b7kSC S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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2 | ![]()
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3 | ![]()
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4 | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 22905.924 Da / Num. of mol.: 4 / Fragment: residues 96-295 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Gene: SCO1 / Plasmid: pET-3a / Production host: ![]() ![]() #2: Chemical | ChemComp-CU / #3: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2 Å3/Da / Density % sol: 36.8 % |
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Crystal grow | Temperature: 291 K / pH: 5.3 Details: Lithium Sulfate, Sodium Citrate, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K, pH 5.30 |
-Data collection
Diffraction | Mean temperature: 113 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: MARRESEARCH / Detector: CCD / Date: Mar 27, 2005 |
Radiation | Monochromator: GLASS / Protocol: MAD / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.3768 Å / Relative weight: 1 |
Reflection | Resolution: 2.3→81.65 Å / Num. obs: 24962 / % possible obs: 79 % / Observed criterion σ(I): 0 / Rsym value: 0.062 / Net I/σ(I): 9.6 |
Reflection shell | Resolution: 2.3→2.42 Å / Mean I/σ(I) obs: 2.5 / Rsym value: 0.3 / % possible all: 42.6 |
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Processing
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Refinement | Method to determine structure: ![]() Starting model: PDB ENTRY 2B7K Resolution: 2.3→81.65 Å / σ(F): 0 / Stereochemistry target values: ENGH & HUBER
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Displacement parameters | Biso mean: 44.1 Å2
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Refinement step | Cycle: LAST / Resolution: 2.3→81.65 Å
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Refine LS restraints |
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