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Open data
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Basic information
Entry | Database: PDB / ID: 2b7k | ||||||
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Title | Crystal Structure of Yeast Sco1 | ||||||
![]() | SCO1 protein | ||||||
![]() | METAL BINDING PROTEIN / Metallochaperone / Cytochrome c Oxidase / Sco / Sco1 | ||||||
Function / homology | ![]() copper chaperone activity / mitochondrial cytochrome c oxidase assembly / intracellular copper ion homeostasis / cell redox homeostasis / cellular response to oxidative stress / mitochondrial inner membrane / copper ion binding / mitochondrion Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Abajian, C. / Rosenzweig, A.C. | ||||||
![]() | ![]() Title: Crystal structure of yeast Sco1. Authors: Abajian, C. / Rosenzweig, A.C. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 146.6 KB | Display | ![]() |
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PDB format | ![]() | 114.2 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 453.6 KB | Display | ![]() |
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Full document | ![]() | 464.9 KB | Display | |
Data in XML | ![]() | 30 KB | Display | |
Data in CIF | ![]() | 42.4 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 2b7jC ![]() 1wp0S C: citing same article ( S: Starting model for refinement |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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2 | ![]()
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3 | ![]()
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4 | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 22905.924 Da / Num. of mol.: 4 / Fragment: residues 96-295 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Gene: SCO1 / Plasmid: pET-3a / Production host: ![]() ![]() #2: Chemical | #3: Water | ChemComp-HOH / | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 1.9 Å3/Da / Density % sol: 35.5 % |
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Crystal grow | Temperature: 291 K / pH: 5.3 Details: Lithium Sulfate, Sodium Citrate, pH 5.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K, pH 5.30 |
-Data collection
Diffraction | Mean temperature: 113 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: MARRESEARCH / Detector: CCD / Date: Apr 7, 2003 |
Radiation | Monochromator: GRAPHITE / Protocol: MAD / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.07261 Å / Relative weight: 1 |
Reflection | Resolution: 1.8→32.62 Å / Num. obs: 63909 / % possible obs: 99.2 % / Observed criterion σ(I): 0 / Rsym value: 0.082 / Net I/σ(I): 4.8 |
Reflection shell | Resolution: 1.8→1.9 Å / Mean I/σ(I) obs: 2.5 / Rsym value: 0.243 / % possible all: 99.9 |
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Processing
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Refinement | Method to determine structure: ![]() Starting model: PDB ENTRY 1WP0 MODIFIED VERSION Resolution: 1.8→32.62 Å / σ(F): 0 / Stereochemistry target values: Engh & Huber
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Displacement parameters | Biso mean: 28.1 Å2
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Refinement step | Cycle: LAST / Resolution: 1.8→32.62 Å
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