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- PDB-255d: CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF... -
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Open data
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Basic information
Entry | Database: PDB / ID: 255d | ||||||||||||||||||
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Title | CRYSTAL STRUCTURE OF AN RNA DOUBLE HELIX INCORPORATING A TRACK OF NON-WATSON-CRICK BASE PAIRS | ||||||||||||||||||
![]() | RNA (5'-R(*![]() RNA / A-RNA / DOUBLE HELIX / MISMATCHED | Function / homology | RNA / RNA (> 10) | ![]() Method | ![]() ![]() Holbrook, S.R. / Cheong, C. / Tinoco Jr, I. / Kim, S.-H. | ![]() ![]() Title: Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs. Authors: Holbrook, S.R. / Cheong, C. / Tinoco Jr., I. / Kim, S.H. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 17.3 KB | Display | ![]() |
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PDB format | ![]() | 9.9 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 335.9 KB | Display | ![]() |
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Full document | ![]() | 344.4 KB | Display | |
Data in XML | ![]() | 2.6 KB | Display | |
Data in CIF | ![]() | 3.4 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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Unit cell |
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Components on special symmetry positions |
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Components
#1: RNA chain | Mass: 3804.296 Da / Num. of mol.: 1 / Source method: obtained synthetically |
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#2: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.43 Å3/Da / Density % sol: 49.3 % | ||||||||||||||||||||||||||||||||||||||||||||
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Crystal grow | Method: vapor diffusion / pH: 8.5 / Details: pH 8.50, VAPOR DIFFUSION | ||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions |
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-Data collection
Diffraction | Ambient temp details: ROOM TEMPERATURE |
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Diffraction source | Source: ![]() |
Detector | Type: RIGAKU AFC-5 / Detector: DIFFRACTOMETER |
Radiation | Scattering type: x-ray |
Radiation wavelength | Relative weight: 1 |
Reflection | Highest resolution: 2 Å / Num. obs: 2280 |
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Processing
Software | Name: NUCLSQ / Classification: refinement | ||||||||||||
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Refinement | Resolution: 2→8 Å / σ(F): 1 /
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Refine Biso |
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Refinement step | Cycle: LAST / Resolution: 2→8 Å
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