- PDB-1vlo: Crystal structure of aminomethyltransferase (T protein; tetrahydr... -
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Basic information
Entry
Database: PDB / ID: 1vlo
Title
Crystal structure of aminomethyltransferase (T protein; tetrahydrofolate-dependent) of glycine cleavage system (np417381) from Escherichia coli k12 at 1.70 A resolution
Components
Aminomethyltransferase
Keywords
TRANSFERASE / np417381 / aminomethyltransferase (T protein / tetrahydrofolate-dependent) of glycine cleavage system / STRUCTURAL GENOMICS / JCSG / PROTEIN STRUCTURE INITIATIVE / PSI / Joint Center for Structural Genomics
Function / homology
Function and homology information
aminomethyltransferase / aminomethyltransferase activity / glycine cleavage complex / glycine decarboxylation via glycine cleavage system / transaminase activity / one-carbon metabolic process / cytosol Similarity search - Function
Glycine cleavage system T protein, bacteria / Aminomethyltransferase fragment / Aminomethyltransferase fragment / Glycine cleavage system T protein / Aminomethyltransferase beta-barrel domains / Aminomethyltransferase beta-barrel domains / Glycine cleavage T-protein, C-terminal barrel domain / Glycine cleavage T-protein C-terminal barrel domain / Glycine cleavage T-protein/YgfZ, C-terminal / Probable tRNA modification gtpase trme; domain 1 ...Glycine cleavage system T protein, bacteria / Aminomethyltransferase fragment / Aminomethyltransferase fragment / Glycine cleavage system T protein / Aminomethyltransferase beta-barrel domains / Aminomethyltransferase beta-barrel domains / Glycine cleavage T-protein, C-terminal barrel domain / Glycine cleavage T-protein C-terminal barrel domain / Glycine cleavage T-protein/YgfZ, C-terminal / Probable tRNA modification gtpase trme; domain 1 / Aminomethyltransferase-like / Aminomethyltransferase, folate-binding domain / Aminomethyltransferase folate-binding domain / GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1 / Gyrase A; domain 2 / Elongation Factor Tu (Ef-tu); domain 3 / Few Secondary Structures / Irregular / Alpha-Beta Plaits / Beta Barrel / 2-Layer Sandwich / Mainly Beta / Alpha Beta Similarity search - Domain/homology
SEQUENCE FIVE EXTRA AMINO ACID RESIDUES (GLY,LEU,CYS,GLY AND ARG) WERE ENGINEERED INTO THE C- ...SEQUENCE FIVE EXTRA AMINO ACID RESIDUES (GLY,LEU,CYS,GLY AND ARG) WERE ENGINEERED INTO THE C-TERMINUS OF PROTEIN CHAIN DUE TO THE CONSTRUCT DESIGN IN GENE CLONING PROCESS. ONLY THREE RESIDUES (GLY,LEU AND CYS) OF THESE WERE OBSERVED IN THE DENSITY AND INCLUDED IN THE MODEL. THE N-TERMINAL MET OF THE PROTEIN (NOT INCLUDING THE HIS-TAG LINKER) IS REMOVED FROM THE PROTEIN DUE TO THE CONSTRUCT DESIGN FOR GENE CLONING.
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