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- PDB-1smv: PRIMARY STRUCTURE OF SESBANIA MOSAIC VIRUS COAT PROTEIN: ITS IMPL... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1smv | ||||||
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Title | PRIMARY STRUCTURE OF SESBANIA MOSAIC VIRUS COAT PROTEIN: ITS IMPLICATIONS TO THE ASSEMBLY AND ARCHITECTURE OF THE VIRUS | ||||||
![]() | SESBANIA MOSAIC VIRUS COAT PROTEIN | ||||||
![]() | VIRUS / COAT PROTEIN (VIRAL) / Icosahedral virus | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() | ||||||
Method | ![]() | ||||||
![]() | Bhuvaneshwari, M. / Murthy, M.R.N. | ||||||
![]() | ![]() Title: Structure of sesbania mosaic virus at 3 A resolution. Authors: Bhuvaneshwari, M. / Subramanya, H.S. / Gopinath, K. / Savithri, H.S. / Nayudu, M.V. / Murthy, M.R. #1: ![]() Title: Structure of Sesbania Mosaic Virus at 4.7 Angstroms Resolution and Partial Sequence of the Coat Protein Authors: Subramanya, H.S. / Gopinath, K. / Nayudu, M.V. / Savithri, H.S. / Murthy, M.R.N. #2: ![]() Title: Purification and Partial Characterization of Sesbania Mosaic Virus Authors: Sreenivasulu, P. / Nayudu, M.V. | ||||||
History |
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Remark 285 | THE ENTRY PRESENTED HERE DOES NOT CONTAIN THE COMPLETE CRYSTAL ASYMMETRIC UNIT. IN ADDITION, THE ...THE ENTRY PRESENTED HERE DOES NOT CONTAIN THE COMPLETE CRYSTAL ASYMMETRIC UNIT. IN ADDITION, THE COORDINATES ARE NOT PRESENTED IN THE STANDARD CRYSTAL FRAME. IN ORDER TO GENERATE THE FULL CRYSTAL AU, APPLY THE FOLLOWING TRANSFORMATION MATRIX OR MATRICES AND SELECTED BIOMT RECORDS TO THE COORDINATES, AS SHOWN BELOW. X0 1 0.209973 0.948239 0.238231 0.00000 X0 2 0.157347 -0.273260 0.948984 0.00000 X0 3 0.964962 -0.161777 -0.206580 0.00000 CRYSTAL AU = (X0) * (BIOMT 1-20) * CHAINS A,B,C |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 124.5 KB | Display | ![]() |
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PDB format | ![]() | 96.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 408.2 KB | Display | ![]() |
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Full document | ![]() | 416.4 KB | Display | |
Data in XML | ![]() | 14 KB | Display | |
Data in CIF | ![]() | 20.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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2 |
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3 | ![]()
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4 | ![]()
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5 | ![]()
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6 | ![]()
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Unit cell |
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Symmetry | Point symmetry: (Hermann–Mauguin notation: 532 / Schoenflies symbol: I (icosahedral)) |
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Components
#1: Protein | Mass: 28578.496 Da / Num. of mol.: 3 / Source method: isolated from a natural source / Source: (natural) ![]() #2: Chemical | ChemComp-CA / |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal grow | *PLUS pH: 5.6 / Method: vapor diffusion | ||||||||||||||||||||||||||||||||||||||||
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Components of the solutions | *PLUS
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-Data collection
Reflection | Resolution: 2.9→60 Å / Num. obs: 347170 / % possible obs: 70 % / Observed criterion σ(I): 1 |
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Reflection | *PLUS Rmerge(I) obs: 0.28 |
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Processing
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Refinement | Resolution: 3→10 Å / σ(F): 1
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Refinement step | Cycle: LAST / Resolution: 3→10 Å
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Refine LS restraints |
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Software | *PLUS Name: ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Highest resolution: 3 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS |