登録情報 | データベース: PDB / ID: 1s59 |
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タイトル | Structure of nucleoside diphosphate kinase 2 with bound dGTP from Arabidopsis |
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要素 | Nucleoside diphosphate kinase II |
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キーワード | TRANSFERASE / kinase |
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機能・相同性 | 機能・相同性情報
red, far-red light phototransduction / auxin-activated signaling pathway / nucleoside-diphosphate kinase / thylakoid / chloroplast envelope / UTP biosynthetic process / CTP biosynthetic process / GTP biosynthetic process / nucleoside diphosphate kinase activity / plastid ...red, far-red light phototransduction / auxin-activated signaling pathway / nucleoside-diphosphate kinase / thylakoid / chloroplast envelope / UTP biosynthetic process / CTP biosynthetic process / GTP biosynthetic process / nucleoside diphosphate kinase activity / plastid / chloroplast stroma / response to UV / chloroplast / response to hydrogen peroxide / ATP binding / nucleus / metal ion binding / cytoplasm類似検索 - 分子機能 Nucleoside diphosphate kinase (NDPK)-like domain profile. / Nucleoside diphosphate kinase-like domain / Nucleoside diphosphate kinase, active site / Nucleoside diphosphate kinase (NDPK) active site signature. / Nucleoside diphosphate kinase / Nucleoside diphosphate kinase-like domain / Nucleoside diphosphate kinase / NDK / Nucleoside diphosphate kinase-like domain superfamily / Alpha-Beta Plaits ...Nucleoside diphosphate kinase (NDPK)-like domain profile. / Nucleoside diphosphate kinase-like domain / Nucleoside diphosphate kinase, active site / Nucleoside diphosphate kinase (NDPK) active site signature. / Nucleoside diphosphate kinase / Nucleoside diphosphate kinase-like domain / Nucleoside diphosphate kinase / NDK / Nucleoside diphosphate kinase-like domain superfamily / Alpha-Beta Plaits / 2-Layer Sandwich / Alpha Beta類似検索 - ドメイン・相同性 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE / 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE / Nucleoside diphosphate kinase II, chloroplastic類似検索 - 構成要素 |
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生物種 | Arabidopsis thaliana (シロイヌナズナ) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2.6 Å |
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データ登録者 | Im, Y.J. / Kim, J.-I. / Shen, Y. / Na, Y. / Han, Y.-J. / Kim, S.-H. / Song, P.-S. / Eom, S.H. |
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引用 | ジャーナル: J.Mol.Biol. / 年: 2004 タイトル: Structural analysis of Arabidopsis thaliana nucleoside diphosphate kinase-2 for phytochrome-mediated light signaling 著者: Im, Y.J. / Kim, J.-I. / Shen, Y. / Na, Y. / Han, Y.-J. / Kim, S.-H. / Song, P.-S. / Eom, S.H. |
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履歴 | 登録 | 2004年1月20日 | 登録サイト: RCSB / 処理サイト: PDBJ |
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改定 1.0 | 2004年11月30日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2008年4月29日 | Group: Version format compliance |
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改定 1.2 | 2011年7月13日 | Group: Version format compliance |
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改定 1.3 | 2023年10月25日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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