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- PDB-1p5y: The structures of host range controlling regions of the capsids o... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1p5y | ||||||
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Title | The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants | ||||||
![]() | Coat protein VP2 | ||||||
![]() | VIRUS / parvovirade / CPV / FPV / Icosahedral virus | ||||||
Function / homology | ![]() permeabilization of host organelle membrane involved in viral entry into host cell / symbiont entry into host cell via permeabilization of inner membrane / microtubule-dependent intracellular transport of viral material towards nucleus / adhesion receptor-mediated virion attachment to host cell / T=1 icosahedral viral capsid / host cell / viral penetration into host nucleus / clathrin-dependent endocytosis of virus by host cell / entry receptor-mediated virion attachment to host cell / host cell nucleus ...permeabilization of host organelle membrane involved in viral entry into host cell / symbiont entry into host cell via permeabilization of inner membrane / microtubule-dependent intracellular transport of viral material towards nucleus / adhesion receptor-mediated virion attachment to host cell / T=1 icosahedral viral capsid / host cell / viral penetration into host nucleus / clathrin-dependent endocytosis of virus by host cell / entry receptor-mediated virion attachment to host cell / host cell nucleus / structural molecule activity / metal ion binding Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Agbandje-McKenna, M. / Govindasamy, L. | ||||||
![]() | ![]() Title: Structures of host range-controlling regions of the capsids of canine and feline parvoviruses and mutants. Authors: Govindasamy, L. / Hueffer, K. / Parrish, C.R. / Agbandje-McKenna, M. #1: ![]() Title: The three-dimensional structure of canine parvovirus and its functional implications Authors: Tsao, J. / Chapman, M.S. / Agbandje, M. / Keller, W. / Smith, K. / Wu, H. / Luo, M. / Smith, T.J. / Rossmann, M.G. / Compans, R.W. / Parrish, C.R. #2: ![]() Title: Structure determination of monoclinic canine parvovirus Authors: Tsao, J. / Chapman, M.S. / Wu, H. / Agbandje, M. / Keller, W. / Rossmann, M.G. #3: ![]() Title: The canine parvovirus empty capsid structure Authors: Wu, H. / Rossmann, M.G. | ||||||
History |
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Remark 999 | SEQUENCE AUTHORS STATE THE DENSITY AT POSITION 60 IS FOR GLU, NOT TYR. |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 125.2 KB | Display | ![]() |
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PDB format | ![]() | 102.4 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 367.8 KB | Display | ![]() |
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Full document | ![]() | 386 KB | Display | |
Data in XML | ![]() | 14 KB | Display | |
Data in CIF | ![]() | 20.9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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2 |
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3 | ![]()
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4 | ![]()
| x 6|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
5 | ![]()
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6 | ![]()
| x 60|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unit cell |
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Symmetry | Point symmetry: (Hermann–Mauguin notation: 532 / Schoenflies symbol: I (icosahedral)) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Noncrystallographic symmetry (NCS) | NCS oper:
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