- PDB-1o1u: human ileal lipid-binding protein (ILBP) in free form -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 1o1u
Title
human ileal lipid-binding protein (ILBP) in free form
Components
Gastrotropin
Keywords
LIPID BINDING PROTEIN / BETA CLAM STRUCTURE
Function / homology
Function and homology information
NR1H2 & NR1H3 regulate gene expression to control bile acid homeostasis / Triglyceride catabolism / fatty acid transport / Recycling of bile acids and salts / fatty acid binding / lipid metabolic process / negative regulation of cell population proliferation / lipid binding / membrane / nucleus ...NR1H2 & NR1H3 regulate gene expression to control bile acid homeostasis / Triglyceride catabolism / fatty acid transport / Recycling of bile acids and salts / fatty acid binding / lipid metabolic process / negative regulation of cell population proliferation / lipid binding / membrane / nucleus / cytoplasm / cytosol Similarity search - Function
Gastrotropin / GT / Ileal lipid-binding protein / ILBP / Intestinal 15 kDa protein / I-15P / Intestinal bile acid- ...GT / Ileal lipid-binding protein / ILBP / Intestinal 15 kDa protein / I-15P / Intestinal bile acid-binding protein / I-BABP
Mass: 14258.038 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Homo sapiens (human) / Gene: FABP6 OR ILLBP OR ILBP / Plasmid: pHUGA1 / Production host: Escherichia coli (E. coli) / References: UniProt: P51161
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Experimental details
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Experiment
Experiment
Method: SOLUTION NMR
NMR experiment
Conditions-ID
Experiment-ID
Solution-ID
Type
1
1
1
2D-NOESY
1
2
1
2D DQF-COSY
1
3
1
2D-TOCSY
1
4
2
2D 1H-15N HSQC
1
5
2
3D-NOESY-HMQC
1
6
2
3D-TOCSY-HMQC
1
7
3
3D HNCA
1
8
3
3D HNCO
1
9
3
3D-HCC(CO)NH-TOCSY
1
10
3
3D (H)CCH-COSY
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Sample preparation
Details
Solution-ID
Contents
Solvent system
1
unlabeled
H2O
2
uniform15Nlabeled
H2O
3
uniform15N/13Clabeled
H2O
Sample conditions
Ionic strength: 50 mM KH2PO4 / pH: 6.0 / Pressure: ambient / Temperature: 305 K
Crystal grow
*PLUS
Method: other / Details: NMR
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NMR measurement
NMR spectrometer
Type: Bruker DRX / Manufacturer: Bruker / Model: DRX / Field strength: 600 MHz
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Processing
NMR software
Name
Version
Developer
Classification
XwinNMR
2.6
Bruker
processing
AURELIA
2.7.5
Neidig, K.P.
dataanalysis
Sybyl-TRIAD
16.7
TRIPOS
refinement
Refinement
Method: distance geometry (DIANA), energy minimization (SYBYL) Software ordinal: 1 Details: DIANA, structure based on 1681 nontrivial NOE distances from 2D-NOESY plus 47 h-bond restraints.
NMR ensemble
Conformer selection criteria: lowest DIANA target function / Conformers calculated total number: 100 / Conformers submitted total number: 10
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