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Yorodumi- PDB-1k6g: Solution Structure of Conserved AGNN Tetraloops: Insights into Rn... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1k6g | ||||||||||||||||||
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Title | Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA Processing | ||||||||||||||||||
Components | RNA (5'-R(P*Keywords | RNA / RNA Tetraloop | Function / homology | RNA / RNA (> 10) | Function and homology information Method | SOLUTION NMR / simulated annealing | Authors | Lebars, I. / Lamontagne, B. / Yoshizawa, S. / Abou Elela, S. / Fourmy, D. | Citation | Journal: EMBO J. / Year: 2001 | Title: Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing. Authors: Lebars, I. / Lamontagne, B. / Yoshizawa, S. / Aboul-Elela, S. / Fourmy, D. History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1k6g.cif.gz | 272.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1k6g.ent.gz | 228.9 KB | Display | PDB format |
PDBx/mmJSON format | 1k6g.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1k6g_validation.pdf.gz | 325.5 KB | Display | wwPDB validaton report |
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Full document | 1k6g_full_validation.pdf.gz | 425.2 KB | Display | |
Data in XML | 1k6g_validation.xml.gz | 6.1 KB | Display | |
Data in CIF | 1k6g_validation.cif.gz | 11.5 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/k6/1k6g ftp://data.pdbj.org/pub/pdb/validation_reports/k6/1k6g | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: RNA chain | Mass: 7065.242 Da / Num. of mol.: 1 / Source method: obtained synthetically / Details: Synthetic-T7 RNA transcript |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details |
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Sample conditions |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M | |||||||||||||||
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Radiation wavelength | Relative weight: 1 | |||||||||||||||
NMR spectrometer |
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-Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 | ||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 25 / Conformers submitted total number: 20 |