[English] 日本語
Yorodumi- PDB-1h6q: Translationally Controlled Tumor-associated Protein p23fyp from S... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1h6q | ||||||
---|---|---|---|---|---|---|---|
Title | Translationally Controlled Tumor-associated Protein p23fyp from Schizosaccharomyces pombe | ||||||
Components | TRANSLATIONALLY CONTROLLED TUMOR PROTEIN | ||||||
Keywords | TUMOR-ASSOCIATED PROTEIN / FUNCTION UNKNOWN | ||||||
Function / homology | Function and homology information guanyl nucleotide exchange factor inhibitor activity / cytoplasmic translation / calcium ion binding / nucleus / cytoplasm / cytosol Similarity search - Function | ||||||
Biological species | SCHIZOSACCHAROMYCES POMBE (fission yeast) | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
Model type details | MINIMIZED AVERAGE | ||||||
Authors | Thaw, P. / Baxter, N.J. / Sedelnikova, S.E. / Price, C. / Waltho, J.P. / Craven, C.J. | ||||||
Citation | Journal: Nat. Struct. Biol. / Year: 2001 Title: Structure of TCTP reveals unexpected relationship with guanine nucleotide-free chaperones. Authors: Thaw, P. / Baxter, N.J. / Hounslow, A.M. / Price, C. / Waltho, J.P. / Craven, C.J. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 1h6q.cif.gz | 62.4 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb1h6q.ent.gz | 46.5 KB | Display | PDB format |
PDBx/mmJSON format | 1h6q.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1h6q_validation.pdf.gz | 334.9 KB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 1h6q_full_validation.pdf.gz | 345 KB | Display | |
Data in XML | 1h6q_validation.xml.gz | 6 KB | Display | |
Data in CIF | 1h6q_validation.cif.gz | 7.6 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/h6/1h6q ftp://data.pdbj.org/pub/pdb/validation_reports/h6/1h6q | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
| |||||||||
---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||
NMR ensembles |
|
-Components
#1: Protein | Mass: 19066.473 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) SCHIZOSACCHAROMYCES POMBE (fission yeast) Plasmid: PET22B / Production host: ESCHERICHIA COLI (E. coli) / Strain (production host): BL21(DE3) / References: UniProt: Q10344 |
---|
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
---|---|
NMR experiment | Type: NOESY |
NMR details | Text: CLOSEST STRUCTURE TO THE MEAN. THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY |
-Sample preparation
Sample conditions | Ionic strength: 250MM NACL / pH: 5.1 / Pressure: 1 atm / Temperature: 308 K |
---|---|
Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer |
|
---|
-Processing
NMR software |
| ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Method: simulated annealing / Software ordinal: 1 / Details: STANDARD SIMULATED ANNEALING PROTOCOL | ||||||||||||||||
NMR ensemble | Conformer selection criteria: LOWEST ENERGY / Conformers calculated total number: 100 / Conformers submitted total number: 1 |