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- PDB-1fk0: STRUCTURAL BASIS OF NON-SPECIFIC LIPID BINDING IN MAIZE LIPID-TRA... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1fk0 | ||||||
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Title | STRUCTURAL BASIS OF NON-SPECIFIC LIPID BINDING IN MAIZE LIPID-TRANSFER PROTEIN COMPLEXES WITH CAPRIC ACID REVEALED BY HIGH-RESOLUTION X-RAY CRYSTALLOGRAPHY | ||||||
![]() | NONSPECIFIC LIPID-TRANSFER PROTEIN | ||||||
![]() | LIPID TRANSPORT / protein-lipid complex | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() | ||||||
![]() | Han, G.W. / Lee, J.Y. / Song, H.K. / Shin, D.H. / Suh, S.W. | ||||||
![]() | ![]() Title: Structural basis of non-specific lipid binding in maize lipid-transfer protein complexes revealed by high-resolution X-ray crystallography. Authors: Han, G.W. / Lee, J.Y. / Song, H.K. / Chang, C. / Min, K. / Moon, J. / Shin, D.H. / Kopka, M.L. / Sawaya, M.R. / Yuan, H.S. / Kim, T.D. / Choe, J. / Lim, D. / Moon, H.J. / Suh, S.W. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 28 KB | Display | ![]() |
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PDB format | ![]() | 18.3 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 443.2 KB | Display | ![]() |
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Full document | ![]() | 444.3 KB | Display | |
Data in XML | ![]() | 7.1 KB | Display | |
Data in CIF | ![]() | 9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 1fk1C ![]() 1fk2C ![]() 1fk3C ![]() 1fk4C ![]() 1fk5C ![]() 1fk6C ![]() 1fk7C ![]() 1mzlS S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 9062.161 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) ![]() ![]() | ||
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#2: Chemical | ChemComp-DKA / | ||
#3: Chemical | #4: Water | ChemComp-HOH / | |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.36 Å3/Da / Density % sol: 47.94 % | |||||||||||||||||||||||||
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Crystal grow | Temperature: 298 K / Method: vapor diffusion, hanging drop Details: 3.3M Na formate, 10% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K | |||||||||||||||||||||||||
Crystal grow | *PLUS Temperature: 24.5-25.5 ℃ / pH: 8.4 | |||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 298 K |
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Diffraction source | Source: ![]() |
Detector | Type: RIGAKU / Detector: IMAGE PLATE / Date: Jan 1, 1999 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Highest resolution: 1.76 Å / Num. obs: 8379 / % possible obs: 89.2 % / Redundancy: 2.79 % / Rmerge(I) obs: 0.029 |
Reflection | *PLUS Num. measured all: 23393 |
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Processing
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Refinement | Method to determine structure: ![]() Starting model: (PDB code:1mzl) Resolution: 1.8→8 Å / σ(F): 2
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Refinement step | Cycle: LAST / Resolution: 1.8→8 Å
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Refine LS restraints |
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Software | *PLUS Name: ![]() | ||||||||||||||||||||||||
Refinement | *PLUS Highest resolution: 1.8 Å / Lowest resolution: 8 Å / σ(F): 2 / Rfactor obs: 0.214 | ||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||
Displacement parameters | *PLUS |