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Open data
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Basic information
Entry | Database: PDB / ID: 10000000000 | ||||||
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Title | [2Fe-2S]-Ferredoxin from Halobacterium salinarum | ||||||
![]() | FERREDOXIN | ||||||
![]() | IRON-SULFUR PROTEIN / FERREDOXIN / HALOBACTERIUM SALINARUM / HALOPHILIC | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
![]() | Marg, B.-L. / Schweimer, K. / Oesterhelt, D. / Roesch, P. / Sticht, H. | ||||||
![]() | ![]() Title: A Two-Alpha-Helix Extra Domain Mediates the Halophilic Character of a Plant-Type Ferredoxin from Halophilic Archaea. Authors: Marg, B. / Schweimer, K. / Sticht, H. / Oesterhelt, D. #1: Journal: J.Biomol.NMR / Year: 2000 Title: Sequence-Specific 1H, 13C and 15N Resonance Assignments and Secondary Structure of [2Fe-2S] Ferredoxin from Halobacterium Salinarum Authors: Schweimer, K. / Marg, B.-L. / Oesterhelt, D. / Roesch, P. / Sticht, H. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 756.2 KB | Display | ![]() |
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PDB format | ![]() | 654 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 378.5 KB | Display | ![]() |
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Full document | ![]() | 587.8 KB | Display | |
Data in XML | ![]() | 69.8 KB | Display | |
Data in CIF | ![]() | 88.5 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 14295.544 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) ![]() |
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#2: Chemical | ChemComp-ACE / |
#3: Chemical | ChemComp-FES / |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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NMR details | Text: THE STRUCTURE WAS DETERMINED USING HETERONUCLEAR MULTIDIMENSIONAL NMR USING 15N- AND 13C,15N LABELED FERREDOXIN SAMPLES |
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Sample preparation
Details | Contents: 10% WATER/90% D2O |
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Sample conditions | Ionic strength: 500 mM / pH: 6.4 / Pressure: 1 atm / Temperature: 288 K |
-NMR measurement
NMR spectrometer | Type: Bruker DRX / Manufacturer: Bruker / Model: DRX / Field strength: 600 MHz |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 1 Details: REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. FOR RESIDUES 60-71, 87, AND 100-104 NO NMR DISTANCE RESTRAINTS WERE OBTAINED BECAUSE OF THE PROXIMITY TO THE PARAMAGNETIC IRON- ...Details: REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. FOR RESIDUES 60-71, 87, AND 100-104 NO NMR DISTANCE RESTRAINTS WERE OBTAINED BECAUSE OF THE PROXIMITY TO THE PARAMAGNETIC IRON-SULFUR CLUSTER. THE CORRESPONDING RESIDUES WERE NOT RESTRAINED DURING THE STRUCTURE CALCULATION AND ARE THEREFORE ILL-DEFINED. | ||||||||||||||||
NMR ensemble | Conformer selection criteria: LEAST RESTRAINT VIOLATION, LOWEST ENERGY Conformers calculated total number: 60 / Conformers submitted total number: 20 |