[English] 日本語
![](img/lk-miru.gif)
- PDB-1cto: NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF THE LIGAND-BINDING REGI... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 1cto | ||||||
---|---|---|---|---|---|---|---|
Title | NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF THE LIGAND-BINDING REGION OF MURINE GRANULOCYTE COLONY-STIMULATING FACTOR RECEPTOR, MINIMIZED AVERAGE STRUCTURE | ||||||
![]() | GRANULOCYTE COLONY-STIMULATING FACTOR RECEPTOR | ||||||
![]() | BINDING PROTEIN / CYTOKINE RECEPTOR | ||||||
Function / homology | ![]() granulocyte colony-stimulating factor binding / regulation of myeloid cell differentiation / amelogenesis / cytokine receptor activity / immunoglobulin mediated immune response / neutrophil chemotaxis / cytokine-mediated signaling pathway / endocytic vesicle membrane / cell adhesion / external side of plasma membrane / plasma membrane Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR / RANDOM.INP, DGSA.INP, REFINE.INP | ||||||
![]() | Yamasaki, K. / Naito, S. / Anaguchi, H. / Ohkubo, T. / Ota, Y. | ||||||
![]() | ![]() Title: Solution structure of an extracellular domain containing the WSxWS motif of the granulocyte colony-stimulating factor receptor and its interaction with ligand. Authors: Yamasaki, K. / Naito, S. / Anaguchi, H. / Ohkubo, T. / Ota, Y. #1: ![]() Title: Ligand Binding Characteristics of the Carboxyl-Terminal Domain of the Cytokine Receptor Homologous Region of the Granulocyte Colony-Stimulating Factor Receptor Authors: Anaguchi, H. / Hiraoka, O. / Yamasaki, K. / Naito, S. / Ota, Y. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 42.5 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 32.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
---|
-Related structure data
-
Links
-
Assembly
Deposited unit | ![]()
| |||||||||
---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||
NMR ensembles |
|
-
Components
#1: Protein | Mass: 12536.452 Da / Num. of mol.: 1 / Fragment: C-TERMINAL DOMAIN OF THE LIGAND-BINDING REGION / Mutation: INS(G1,S2,S3) Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Description: EXPRESSED AS A FUSION PROTEIN WITH MALTOSE BINDING PROTEIN Plasmid: PMAL-P / Production host: ![]() ![]() |
---|
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NMR experiment |
|
-
Sample preparation
Sample conditions | pH: 5.5 / Temperature: 303 K |
---|---|
Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Bruker AMX600 / Manufacturer: Bruker / Model: AMX600 / Field strength: 600 MHz |
---|
-
Processing
Software |
| ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NMR software |
| ||||||||||||
Refinement | Method: RANDOM.INP, DGSA.INP, REFINE.INP / Software ordinal: 1 | ||||||||||||
NMR ensemble | Conformer selection criteria: MINIMIZED AVERAGE / Conformers calculated total number: 100 / Conformers submitted total number: 1 |