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Yorodumi- PDB-1cpn: NATIVE-LIKE IN VIVO FOLDING OF A CIRCULARLY PERMUTED JELLYROLL PR... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1cpn | ||||||
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Title | NATIVE-LIKE IN VIVO FOLDING OF A CIRCULARLY PERMUTED JELLYROLL PROTEIN SHOWN BY CRYSTAL STRUCTURE ANALYSIS | ||||||
Components | CIRCULARLY PERMUTED | ||||||
Keywords | HYDROLASE(GLUCANASE) | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Paenibacillus macerans (bacteria) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 1.8 Å | ||||||
Authors | Hahn, M. / Heinemann, U. | ||||||
Citation | Journal: Proc.Natl.Acad.Sci.USA / Year: 1994 Title: Native-like in vivo folding of a circularly permuted jellyroll protein shown by crystal structure analysis. Authors: Hahn, M. / Piotukh, K. / Borriss, R. / Heinemann, U. #1: Journal: Proc.Natl.Acad.Sci.USA / Year: 1993 Title: Molecular and Active-Site Structure of a Bacillus 1,3-1,4-Beta-Glucanase Authors: Keitel, T. / Simon, O. / Borriss, R. / Heinemann, U. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1cpn.cif.gz | 51.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1cpn.ent.gz | 39 KB | Display | PDB format |
PDBx/mmJSON format | 1cpn.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/cp/1cpn ftp://data.pdbj.org/pub/pdb/validation_reports/cp/1cpn | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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Atom site foot note | 1: CIS PROLINE - PRO 143 |
-Components
#1: Protein | Mass: 23364.711 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Paenibacillus macerans (bacteria) / References: UniProt: P23904, licheninase |
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#2: Chemical | ChemComp-CA / |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.14 Å3/Da / Density % sol: 42.62 % | ||||||||||||||||||||||||||||||||||||||||||||||||
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Crystal grow | *PLUS pH: 4.3 / Method: unknown | ||||||||||||||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
Reflection | *PLUS Highest resolution: 1.8 Å / Num. obs: 16674 / % possible obs: 90.1 % / Rmerge(I) obs: 0.047 |
-Processing
Software |
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Refinement | Resolution: 1.8→8 Å / σ(F): 1 Details: THE CE ATOM OF MET 122 WAS REFINED IN TWO POSITIONS WITH 0.5 OCCUPANCY FOR EACH POSITION.
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Refinement step | Cycle: LAST / Resolution: 1.8→8 Å
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Refine LS restraints |
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Refinement | *PLUS Rfactor obs: 0.164 / Rfactor Rwork: 0.164 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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