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Yorodumi- PDB-1cap: CONFORMATION AND MOLECULAR ORGANIZATION IN FIBERS OF THE CAPSULAR... -
+Open data
-Basic information
Entry | Database: PDB / ID: 1cap | |||||||||
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Title | CONFORMATION AND MOLECULAR ORGANIZATION IN FIBERS OF THE CAPSULAR POLYSACCHARIDE FROM ESCHERICHIA COLI M41 MUTANT | |||||||||
Components | (0) x alpha-D-mannopyranose-(1-3)-beta-D-glucopyranose-(1-3)-[4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-4)]beta-D-glucopyranuronic acid-(1-3)-beta-D-galactopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-glucopyranose-(1-3)-[4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-4)]beta-D-glucopyranuronic acid-(1-3)-beta-D-galactopyranose | |||||||||
Keywords | BACTERIAL ENCAPSULATION | |||||||||
Method | FIBER DIFFRACTION / Resolution: 3 Å | |||||||||
Authors | Arnott, S. | |||||||||
Citation | Journal: J.Mol.Biol. / Year: 1977 Title: Conformation and molecular organization in fibers of the capsular polysaccharide from Escherichia coli M41 mutant. Authors: Moorhouse, R. / Winter, W.T. / Arnott, S. / Bayer, M.E. #1: Journal: Acta Crystallogr.,Sect.A / Year: 1978 Title: Lals, a Linked-Atom Least-Squares Reciprocal-Space Refinement System Incorporating Stereochemical Restraints to Supplement Sparse Diffraction Data Authors: Smith, P.J.C. / Arnott, S. | |||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1cap.cif.gz | 14.3 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1cap.ent.gz | 9.1 KB | Display | PDB format |
PDBx/mmJSON format | 1cap.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 1cap_validation.pdf.gz | 420.6 KB | Display | wwPDB validaton report |
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Full document | 1cap_full_validation.pdf.gz | 439.4 KB | Display | |
Data in XML | 1cap_validation.xml.gz | 5.3 KB | Display | |
Data in CIF | 1cap_validation.cif.gz | 6.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ca/1cap ftp://data.pdbj.org/pub/pdb/validation_reports/ca/1cap | HTTPS FTP |
-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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Details | A 21 SCREW AXIS PARALLEL TO Z PASSES THROUGH X=0,Y=0 AND THE 21 AXIS PARALLEL TO X IS IN THE Z=0 PLANE. THE SCREW AXIS PARALLEL TO Z WAS USED TO GENERATE THE TWELVE-RESIDUE SEGMENT FROM THE PUBLISHED COORDINATES FOR THE SIX-RESIDUE ASYMMETRIC UNIT. |
-Components
#1: Polysaccharide | alpha-D-mannopyranose-(1-3)-beta-D-glucopyranose-(1-3)-[4,6-O-[(1S)-1-carboxyethylidene]-beta-D- ...alpha-D-mannopyranose-(1-3)-beta-D-glucopyranose-(1-3)-[4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-4)]beta-D-glucopyranuronic acid-(1-3)-beta-D-galactopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-glucopyranose-(1-3)-[4,6-O-[(1S)-1-carboxyethylidene]-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-4)]beta-D-glucopyranuronic acid-(1-3)-beta-D-galactopyranose Type: oligosaccharide / Mass: 2131.765 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source |
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-Experimental details
-Experiment
Experiment | Method: FIBER DIFFRACTION |
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-Sample preparation
Crystal grow | *PLUS Method: unknown |
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-Data collection
Radiation wavelength | Relative weight: 1 |
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-Processing
Software |
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Refinement | Highest resolution: 3 Å Details: THE SPACE GROUP USED IN THE ANALYSIS OF THIS STRUCTURE IS P 21 21 21 IN A NON-STANDARD SETTING. THE EQUIPOINTS FOR THIS GROUP IN THE SETTING USED ARE- X,Y,Z -X,-Y,1/2+Z -X,1/2+Y,1/2-Z 1/2+X,1/2-Y,-Z | ||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 3 Å
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