[English] 日本語
![](img/lk-miru.gif)
- PDB-1bhw: LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF XYLOSE ISOMERASE F... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 1bhw | ||||||
---|---|---|---|---|---|---|---|
Title | LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF XYLOSE ISOMERASE FROM MASC DATA | ||||||
![]() | XYLOSE ISOMERASE | ||||||
![]() | ISOMERASE / MASC / MULTIWAVELENGTH ANOMALOUS SOLVENT CONTRAST | ||||||
Function / homology | ![]() xylose isomerase / D-xylose metabolic process / xylose isomerase activity / magnesium ion binding / cytoplasm Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Ramin, M. / Shepard, W. / Fourme, R. / Kahn, R. | ||||||
![]() | ![]() Title: Multiwavelength anomalous solvent contrast (MASC): derivation of envelope structure-factor amplitudes and comparison with model values. Authors: Ramin, M. / Shepard, W. / Fourme, R. / Kahn, R. #1: ![]() Title: Structural Analysis of the 2.8 A Model of Xylose Isomerase from Actinoplanes Missouriensis Authors: Rey, F. / Jenkins, J. / Janin, J. / Lasters, I. / Alard, P. / Claessens, M. / Matthyssens, G. / Wodak, S. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 265.9 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 209.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 391.2 KB | Display | ![]() |
---|---|---|---|---|
Full document | ![]() | 442.7 KB | Display | |
Data in XML | ![]() | 35.9 KB | Display | |
Data in CIF | ![]() | 53.5 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 1bhyC ![]() 1bhzC ![]() 1xinS S: Starting model for refinement C: citing same article ( |
---|---|
Similar structure data |
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||
Unit cell |
|
-
Components
#1: Protein | Mass: 43397.465 Da / Num. of mol.: 4 / Mutation: H220N Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() |
---|
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 3.7 Å3/Da / Density % sol: 62.6 % |
---|---|
Crystal grow | Details: PROTEIN WAS CRYSTALLIZED FROM AMMONIUM SULPHATE |
-Data collection
Diffraction | Mean temperature: 124 K |
---|---|
Diffraction source | Source: ![]() ![]() ![]() ![]() ![]() |
Detector | Type: MAR scanner 300 mm plate / Detector: IMAGE PLATE / Date: Jun 1, 1995 / Details: MIRRORS |
Radiation | Monochromator: SI(111) / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.99 Å / Relative weight: 1 |
Reflection | Resolution: 4.12→105.4 Å / Num. obs: 19684 / % possible obs: 97.3 % / Observed criterion σ(I): 3 / Redundancy: 5.6 % / Rmerge(I) obs: 0.037 / Rsym value: 0.037 / Net I/σ(I): 17.3 |
Reflection shell | Resolution: 4.12→4.29 Å / Redundancy: 3.3 % / Rmerge(I) obs: 0.041 / Mean I/σ(I) obs: 16.1 / Rsym value: 0.041 / % possible all: 75 |
Reflection | *PLUS Num. measured all: 110358 |
-
Processing
Software |
| |||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Method to determine structure: ![]() Starting model: 1XIN Resolution: 4.1→8 Å / Cross valid method: THROUGHOUT
| |||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 4.1→8 Å
|