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- PDB-1bgc: CRYSTAL STRUCTURE OF CANINE AND BOVINE GRANULOCYTE-COLONY STIMULA... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1bgc | ||||||
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Title | CRYSTAL STRUCTURE OF CANINE AND BOVINE GRANULOCYTE-COLONY STIMULATING FACTOR (G-CSF) | ||||||
![]() | GRANULOCYTE COLONY-STIMULATING FACTOR | ||||||
![]() | CYTOKINE | ||||||
Function / homology | ![]() Other interleukin signaling / : / granulocyte colony-stimulating factor receptor binding / : / positive regulation of myeloid cell differentiation / positive regulation of actin filament polymerization / cellular response to cytokine stimulus / cytokine activity / growth factor activity / positive regulation of DNA-binding transcription factor activity ...Other interleukin signaling / : / granulocyte colony-stimulating factor receptor binding / : / positive regulation of myeloid cell differentiation / positive regulation of actin filament polymerization / cellular response to cytokine stimulus / cytokine activity / growth factor activity / positive regulation of DNA-binding transcription factor activity / positive regulation of peptidyl-tyrosine phosphorylation / positive regulation of protein binding / positive regulation of peptidyl-serine phosphorylation / positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction / immune response / positive regulation of cell population proliferation / enzyme binding / positive regulation of transcription by RNA polymerase II / extracellular space Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() | ||||||
![]() | Lovejoy, B. / Cascio, D. / Eisenberg, D. | ||||||
![]() | ![]() Title: Crystal structure of canine and bovine granulocyte-colony stimulating factor (G-CSF). Authors: Lovejoy, B. / Cascio, D. / Eisenberg, D. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 51.7 KB | Display | ![]() |
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PDB format | ![]() | 38.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 398.9 KB | Display | ![]() |
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Full document | ![]() | 401.7 KB | Display | |
Data in XML | ![]() | 5.9 KB | Display | |
Data in CIF | ![]() | 8.1 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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1 |
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Unit cell |
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Components
#1: Protein | Mass: 18971.906 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() |
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#2: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 1.86 Å3/Da / Density % sol: 34.03 % | ||||||||||||||||||||||||
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Crystal grow | *PLUS pH: 3.8 / Method: vapor diffusion, hanging drop | ||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Radiation | Scattering type: x-ray |
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Radiation wavelength | Relative weight: 1 |
Reflection | *PLUS Highest resolution: 1.7 Å / Num. obs: 15100 / % possible obs: 93 % / Observed criterion σ(F): 1 / Num. measured all: 74290 / Rmerge(I) obs: 0.055 |
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Processing
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Refinement | Resolution: 1.7→7 Å / σ(F): 1 /
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Refinement step | Cycle: LAST / Resolution: 1.7→7 Å
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Refine LS restraints |
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Refinement | *PLUS Highest resolution: 1.7 Å / Lowest resolution: 7 Å / Num. reflection obs: 14989 / σ(F): 1 / Rfactor obs: 0.213 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS Type: x_angle_d |