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- PDB-1b9p: NMR STRUCTURE OF HEPARIN BINDING SITE OF NON COLLAGENOUS DOMAIN I... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1b9p | ||||||
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Title | NMR STRUCTURE OF HEPARIN BINDING SITE OF NON COLLAGENOUS DOMAIN I (NC1) OF COLLAGEN FACIT XIV | ||||||
![]() | PROTEIN (COLLAGEN ALPHA 1) | ||||||
![]() | COLLAGEN FACIT XIV / HEPARIN-BINDING SITE / NC1 | ||||||
Function / homology | ![]() interstitial matrix / collagen trimer / cell adhesion / extracellular space Similarity search - Function | ||||||
Biological species | synthetic construct (others) | ||||||
Method | SOLUTION NMR / distance geometry | ||||||
![]() | Montserret, R. / Deleage, G. / Penin, F. | ||||||
![]() | ![]() Title: Structural analysis of the heparin-binding site of the NC1 domain of collagen XIV by CD and NMR. Authors: Montserret, R. / Aubert-Foucher, E. / McLeish, M.J. / Hill, J.M. / Ficheux, D. / Jaquinod, M. / van der Rest, M. / Deleage, G. / Penin, F. #1: Journal: Matrix Biol. / Year: 1998 Title: Identification and characterization of a heparin binding site within the NC1 domain of chicken collagen XIV. Authors: Giry-Lozinguez, C. / Aubert-Foucher, E. / Penin, F. / Deleage, G. / Dublet, B. / van der Rest, M. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 21.2 KB | Display | ![]() |
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PDB format | ![]() | 13.9 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 331.7 KB | Display | ![]() |
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Full document | ![]() | 331.8 KB | Display | |
Data in XML | ![]() | 2.1 KB | Display | |
Data in CIF | ![]() | 2.3 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein/peptide | Mass: 4020.755 Da / Num. of mol.: 1 / Fragment: FRAGMENT 84-116 OF NC1 (HEPARIN BINDING SITE) / Mutation: E1C / Source method: obtained synthetically Details: THE PROTEIN WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE OF THIS PROTEIN IS NATURALLY FOUND EXTRACELLULARLY IN THE EMBRYO OF GALLUS GALLUS (CHICKEN). Source: (synth.) synthetic construct (others) / References: UniProt: P32018 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||
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NMR experiment |
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NMR details | Text: AVERAGED STRUCTURE |
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Sample preparation
Sample conditions | pH: 6.0 / Pressure: 1 atm / Temperature: 293 K |
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Crystal grow | *PLUS Method: other / Details: NMR |
-NMR measurement
NMR spectrometer | Type: Varian UNITYPLUS / Manufacturer: Varian / Model: UNITYPLUS / Field strength: 500 MHz |
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Processing
NMR software |
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Refinement | Method: distance geometry / Software ordinal: 1 | ||||||||||||
NMR ensemble | Conformer selection criteria: NO RESTRAINT VIOLATION / Conformers calculated total number: 50 / Conformers submitted total number: 1 |