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- SASDBT4: Bovine serum albumin monomer (measured by SEC-SAXS) -

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Open data


ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDBT4
SampleBovine serum albumin monomer (measured by SEC-SAXS)
  • Bovine serum albumin, monomer (protein), BSA monomer, Bos taurus
Function / homology
Function and homology information


enterobactin binding / cellular response to calcium ion starvation / negative regulation of mitochondrial depolarization / toxic substance binding / cellular response to starvation / fatty acid binding / pyridoxal phosphate binding / protein-containing complex / DNA binding / extracellular space ...enterobactin binding / cellular response to calcium ion starvation / negative regulation of mitochondrial depolarization / toxic substance binding / cellular response to starvation / fatty acid binding / pyridoxal phosphate binding / protein-containing complex / DNA binding / extracellular space / extracellular region / metal ion binding / cytoplasm
Similarity search - Function
Serum albumin/Alpha-fetoprotein/Afamin / ALB/AFP/VDB / Serum albumin, N-terminal / Serum albumin, conserved site / Serum albumin-like / Serum albumin family / Albumin domain signature. / Albumin domain profile. / serum albumin
Similarity search - Domain/homology
Biological speciesBos taurus (cattle)
Contact author
  • Martha Brennich (EMBL, European Molecular Biology Laboratory (EMBL) - Grenoble Outstation, Grenoble, France)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #533
Type: atomic / Radius of dummy atoms: 1.90 A / Chi-square value: 2.407
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Bovine serum albumin monomer (measured by SEC-SAXS) / Specimen concentration: 10 mg/ml
BufferName: 20 mM Tris 142 mM NaCl 5 % Glycerol 1mM DTT / Concentration: 20.00 mM / pH: 7 / Composition: 142 mM NaCl, 5 % Glycerol, 1mM DTT
Entity #298Name: BSA monomer / Type: protein / Description: Bovine serum albumin, monomer / Formula weight: 66.462 / Num. of mol.: 1 / Source: Bos taurus / References: UniProt: P02769
Sequence: DTHKSEIAHR FKDLGEEHFK GLVLIAFSQY LQQCPFDEHV KLVNELTEFA KTCVADESHA GCEKSLHTLF GDELCKVASL RETYGDMADC CEKQEPERNE CFLSHKDDSP DLPKLKPDPN TLCDEFKADE KKFWGKYLYE IARRHPYFYA PELLYYANKY NGVFQECCQA ...Sequence:
DTHKSEIAHR FKDLGEEHFK GLVLIAFSQY LQQCPFDEHV KLVNELTEFA KTCVADESHA GCEKSLHTLF GDELCKVASL RETYGDMADC CEKQEPERNE CFLSHKDDSP DLPKLKPDPN TLCDEFKADE KKFWGKYLYE IARRHPYFYA PELLYYANKY NGVFQECCQA EDKGACLLPK IETMREKVLT SSARQRLRCA SIQKFGERAL KAWSVARLSQ KFPKAEFVEV TKLVTDLTKV HKECCHGDLL ECADDRADLA KYICDNQDTI SSKLKECCDK PLLEKSHCIA EVEKDAIPEN LPPLTADFAE DKDVCKNYQE AKDAFLGSFL YEYSRRHPEY AVSVLLRLAK EYEATLEECC AKDDPHACYS TVFDKLKHLV DEPQNLIKQN CDQFEKLGEY GFQNALIVRY TRKVPQVSTP TLVEVSRSLG KVGTRCCTKP ESERMPCTED YLSLILNRLC VLHEKTPVSE KVTKCCTESL VNRRPCFSAL TPDETYVPKA FDEKLFTFHA DICTLPDTEK QIKKQTALVE LLKHKPKATE EQLKTVMENF VAFVDKCCAA DDKEACFAVE GPKLVVSTQT ALA

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Experimental information

BeamInstrument name: ESRF BM29 / City: Grenoble / 国: France / Type of source: X-ray synchrotron / Wavelength: 0.93 Å / Dist. spec. to detc.: 2.43 mm
DetectorName: Pilatus 1M / Type: Dectris / Pixsize x: 172 mm
Scan
Title: Bovine Serum Albumin (BSA), monomer / Measurement date: Feb 22, 2016 / Storage temperature: 20 °C / Cell temperature: 20 °C / Exposure time: 1 sec. / Number of frames: 40 / Unit: 1/nm /
MinMax
Q0.1319 4.8646
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 655 /
MinMax
Q0.131862 3.21475
P(R) point1 655
R0 8.15
Result
Type of curve: other /
ExperimentalPorod
MW58 kDa69 kDa
Volume-118 nm3

P(R)P(R) errorGuinierGuinier error
Forward scattering, I0152.1 0.04 150.78 0.072
Radius of gyration, Rg2.77 nm0.008 2.71 nm0.02

MinMax
D-8.15
Guinier point1 45

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