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Yorodumi- SASDBM7: Subdomain SL1 of hepatitis C virus RNA domain 3'X at low ionic st... -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDBM7 |
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Sample | Subdomain SL1 of hepatitis C virus RNA domain 3'X at low ionic strength
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Biological species | Hepatitis C virus |
Citation | Date: 2017 Jun 19 Title: Three-dimensional structure of the 3′X-tail of hepatitis C virus RNA in monomeric and dimeric states Authors: Cantero-Camacho A / Fan L / Wang Y |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Models
Model #901 | Type: dummy / Radius of dummy atoms: 1.75 A / Symmetry: 1 / Chi-square value: 0.321 / P-value: 0.002000 Search similar-shape structures of this assembly by Omokage search (details) |
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-Sample
Sample | Name: Subdomain SL1 of hepatitis C virus RNA domain 3'X at low ionic strength Specimen concentration: 0.50-2.00 |
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Buffer | Name: 10mM Tris 0.1 mM EDTA / pH: 7 |
Entity #522 | Name: SL1 / Type: RNA / Description: Subdomain SL1 of hepatitis C virus / Formula weight: 14.9 / Num. of mol.: 1 / Source: Hepatitis C virus Sequence: GCUUGACUGC AGAGAGUGCU GAUACUGGCC UCUCUGCAGA UCAAGU |
-Experimental information
Beam | Instrument name: Advanced Photon Source (APS) 12ID-B SAXS/WAXS City: Argonne, IL / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.0886 Å / Dist. spec. to detc.: 2 mm | ||||||||||||||||||||||||
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Detector | Name: Pilatus 2M | ||||||||||||||||||||||||
Scan | Title: Subdomain SL1 of hepatitis C virus RNA domain 3'X / Measurement date: Nov 11, 2015 / Storage temperature: 27 °C / Cell temperature: 27 °C / Exposure time: 1 sec. / Number of frames: 30 / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 4.6 / Number of points: 150 /
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Result | Experimental MW: 15.2 kDa / Type of curve: extrapolated
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