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- PDB-7kzp: Structure of the human Fanconi anaemia Core complex -

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基本情報

登録情報
データベース: PDB / ID: 7kzp
タイトルStructure of the human Fanconi anaemia Core complex
要素
  • (Fanconi anemia core complex-associated protein ...) x 2
  • (Fanconi anemia group ...) x 6
  • E3 ubiquitin-protein ligase FANCL
キーワードLIGASE (リガーゼ) / Complex
機能・相同性
機能・相同性情報


regulation of germ cell proliferation / regulation of CD40 signaling pathway / Fanconi anaemia nuclear complex / regulation of regulatory T cell differentiation / male meiotic nuclear division / gamete generation / replication-born double-strand break repair via sister chromatid exchange / neuronal stem cell population maintenance / brain morphogenesis / myeloid cell homeostasis ...regulation of germ cell proliferation / regulation of CD40 signaling pathway / Fanconi anaemia nuclear complex / regulation of regulatory T cell differentiation / male meiotic nuclear division / gamete generation / replication-born double-strand break repair via sister chromatid exchange / neuronal stem cell population maintenance / brain morphogenesis / myeloid cell homeostasis / female gonad development / germ cell development / protein monoubiquitination / positive regulation of double-strand break repair via homologous recombination / spermatid development / negative regulation of double-strand break repair via homologous recombination / interstrand cross-link repair / ovarian follicle development / removal of superoxide radicals / mitochondrion organization / nucleotide-excision repair / Fanconi Anemia Pathway / TP53 Regulates Transcription of DNA Repair Genes / RING-type E3 ubiquitin transferase / response to radiation / PKR-mediated signaling / ubiquitin-protein transferase activity / male gonad development / ubiquitin protein ligase activity / 核膜 / 染色体 / cellular response to oxidative stress / regulation of cell population proliferation / regulation of inflammatory response / protein-containing complex assembly / damaged DNA binding / nuclear body / intracellular membrane-bounded organelle / DNA修復 / 中心体 / DNA damage response / ubiquitin protein ligase binding / クロマチン / 核小体 / ミトコンドリア / DNA binding / 核質 / metal ion binding / 細胞核 / 細胞膜 / 細胞質基質 / 細胞質
類似検索 - 分子機能
Fanconi anaemia group C protein / Fanconi anemia-associated protein of 100kDa / Fanconi anemia group B protein / Fanconi anemia group G protein / Fanconi anaemia group C protein / Fanconi anemia-associated / Fanconi Anaemia group E protein, C-terminal / Fanconi anemia group F protein / FANCF, C-terminal domain superfamily / Fanconi anemia group E protein ...Fanconi anaemia group C protein / Fanconi anemia-associated protein of 100kDa / Fanconi anemia group B protein / Fanconi anemia group G protein / Fanconi anaemia group C protein / Fanconi anemia-associated / Fanconi Anaemia group E protein, C-terminal / Fanconi anemia group F protein / FANCF, C-terminal domain superfamily / Fanconi anemia group E protein / Fanconi anemia group F protein (FANCF) / Fanconi Anaemia group E protein FANCE / Fanconi anaemia group A protein / Fanconi anaemia group A protein, N-terminal domain / Fanconi anaemia group A protein / Fanconi anaemia group A protein N terminus / FANCL, UBC-like domain 2 / FANCL, UBC-like domain 3 / Fanconi anemia complex, subunit FancL, WD-repeat containing domain / E3 ubiquitin-protein ligase FANCL / FANCL C-terminal domain / FANCL, UBC-like domain 3 superfamily / FANCL UBC-like domain 1 / FANCL C-terminal domain / FANCL UBC-like domain 2 / FANCL UBC-like domain 3 / FANCL C-terminal domain / Ubiquitin-conjugating enzyme/RWD-like / Tetratricopeptide repeats / Tetratricopeptide repeat / Tetratricopeptide-like helical domain superfamily / Zinc finger, RING/FYVE/PHD-type
類似検索 - ドメイン・相同性
Fanconi anemia group G protein / Fanconi anemia group A protein / Fanconi anemia group C protein / Fanconi anemia core complex-associated protein 100 / Fanconi anemia group B protein / Fanconi anemia group E protein / Fanconi anemia group F protein / E3 ubiquitin-protein ligase FANCL
類似検索 - 構成要素
生物種Homo sapiens (ヒト)
手法電子顕微鏡法 / 単粒子再構成法 / クライオ電子顕微鏡法 / 解像度: 3.1 Å
データ登録者Wang, S.L. / Pavletich, N.P.
資金援助 米国, 1件
組織認可番号国
Howard Hughes Medical Institute (HHMI) 米国
引用ジャーナル: Nat Struct Mol Biol / 年: 2021
タイトル: Structure of the FA core ubiquitin ligase closing the ID clamp on DNA.
著者: Shengliu Wang / Renjing Wang / Christopher Peralta / Ayat Yaseen / Nikola P Pavletich /
要旨: The Fanconi anemia (FA) pathway is essential for the repair of DNA interstrand crosslinks. Central to the pathway is the FA core complex, a ubiquitin ligase of nine subunits that monoubiquitinates ...The Fanconi anemia (FA) pathway is essential for the repair of DNA interstrand crosslinks. Central to the pathway is the FA core complex, a ubiquitin ligase of nine subunits that monoubiquitinates the FANCI-FANCD2 (ID) DNA clamp. The 3.1 Å structure of the 1.1-MDa human FA core complex, described here, reveals an asymmetric assembly with two copies of all but the FANCC, FANCE and FANCF subunits. The asymmetry is crucial, as it prevents the binding of a second FANCC-FANCE-FANCF subcomplex that inhibits the recruitment of the UBE2T ubiquitin conjugating enzyme, and instead creates an ID binding site. A single active site then ubiquitinates FANCD2 and FANCI sequentially. We also present the 4.2-Å structures of the human core-UBE2T-ID-DNA complex in three conformations captured during monoubiquitination. They reveal the core-UBE2T complex remodeling the ID-DNA complex, closing the clamp on the DNA before ubiquitination. Monoubiquitination then prevents clamp opening after release from the core.
履歴
登録2020年12月10日登録サイト: RCSB / 処理サイト: RCSB
改定 1.02021年3月10日Provider: repository / タイプ: Initial release
改定 1.12021年3月24日Group: Database references / カテゴリ: citation / citation_author
Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation.title / _citation_author.identifier_ORCID / _citation_author.name
改定 1.22024年3月6日Group: Data collection / Database references / カテゴリ: chem_comp_atom / chem_comp_bond / database_2
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession

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構造の表示

ムービー
  • 登録構造単位
  • Jmolによる作画
  • ダウンロード
  • EMマップとの重ね合わせ
  • マップデータ: EMDB-23085
  • UCSF Chimeraによる作画
  • ダウンロード
ムービービューア
構造ビューア分子:
MolmilJmol/JSmol

ダウンロードとリンク

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集合体

登録構造単位
A: Fanconi anemia group A protein
B: Fanconi anemia group B protein
C: Fanconi anemia group C protein
E: Fanconi anemia group E protein
F: Fanconi anemia group F protein
G: Fanconi anemia group G protein
H: Fanconi anemia group G protein
L: E3 ubiquitin-protein ligase FANCL
M: E3 ubiquitin-protein ligase FANCL
O: Fanconi anemia group B protein
P: Fanconi anemia core complex-associated protein 100
Q: Fanconi anemia core complex-associated protein 100
S: Fanconi anemia group A protein
W: Fanconi anemia core complex-associated protein 20
ヘテロ分子


分子量 (理論値)分子数
合計 (水以外)1,134,15217
ポリマ－1,133,95614
非ポリマー1963
水0
1


  • 登録構造と同一
  • 登録者が定義した集合体
  • 根拠: microscopy
タイプ名称対称操作数
identity operation1_5551

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要素

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Fanconi anemia group ... , 6種, 9分子 ASBOCEFGH

#1: タンパク質 Fanconi anemia group A protein / Protein FACA


分子量: 165513.016 Da / 分子数: 2 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FANCA, FAA, FACA, FANCH / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: O15360
#2: タンパク質 Fanconi anemia group B protein / Protein FACB / Fanconi anemia-associated polypeptide of 95 kDa / FAAP95


分子量: 100640.172 Da / 分子数: 2 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FANCB / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: Q8NB91
#3: タンパク質 Fanconi anemia group C protein / Protein FACC


分子量: 66290.359 Da / 分子数: 1 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FANCC, FAC, FACC / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: Q00597
#4: タンパク質 Fanconi anemia group E protein / Protein FACE


分子量: 61026.086 Da / 分子数: 1 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FANCE, FACE / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: Q9HB96
#5: タンパク質 Fanconi anemia group F protein / Protein FACF


分子量: 45108.297 Da / 分子数: 1 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FANCF / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: Q9NPI8
#6: タンパク質 Fanconi anemia group G protein / Protein FACG / DNA repair protein XRCC9


分子量: 70873.727 Da / 分子数: 2 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FANCG, XRCC9 / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: O15287

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Fanconi anemia core complex-associated protein ... , 2種, 3分子 PQW

#8: タンパク質 Fanconi anemia core complex-associated protein 100 / Fanconi anemia-associated protein of 100 kDa


分子量: 96513.898 Da / 分子数: 2 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FAAP100, C17orf70 / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: Q0VG06
#9: タンパク質・ペプチド Fanconi anemia core complex-associated protein 20


分子量: 4041.667 Da / 分子数: 1 / 由来タイプ: 天然 / 由来: (天然) Homo sapiens (ヒト)

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タンパク質 / 非ポリマー , 2種, 5分子 LM

#10: 化合物 ChemComp-ZN / ZINC ION


分子量: 65.409 Da / 分子数: 3 / 由来タイプ: 合成 / 式: Zn
#7: タンパク質 E3 ubiquitin-protein ligase FANCL / Fanconi anemia group L protein / Fanconi anemia-associated polypeptide of 43 kDa / FAAP43 / RING- ...Fanconi anemia group L protein / Fanconi anemia-associated polypeptide of 43 kDa / FAAP43 / RING-type E3 ubiquitin transferase FANCL


分子量: 45203.953 Da / 分子数: 2 / 由来タイプ: 組換発現 / 由来: (組換発現) Homo sapiens (ヒト) / 遺伝子: FANCL, PHF9 / 発現宿主: Homo sapiens (ヒト) / 参照: UniProt: Q9NW38, RING-type E3 ubiquitin transferase

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詳細

研究の焦点であるリガンドがあるかN
配列の詳細The complete sequence of FAAP20 is MEAARRPRLGLSRRRPPPAGGPSGGRPWFLLGGDERERLWAELLRTVSPELILDHEVPSL ...The complete sequence of FAAP20 is MEAARRPRLGLSRRRPPPAGGPSGGRPWFLLGGDERERLWAELLRTVSPELILDHEVPSL PAFPGQEPRCGPEPTEVFTVGPKTFSWTPFPPDLWGPGRSYRLLHGAGGHLESPARSLPQ RPAPDPCRAPRVEQQPSVEGAAALRSCPMCQKEFAPRLTQLDVDSHLAQCLAESTEDVTW

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実験情報

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実験

実験手法: 電子顕微鏡法
EM実験試料の集合状態: PARTICLE / ３次元再構成法: 単粒子再構成法

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試料調製

構成要素名称: Human Fanconi Anaemia Core complex / タイプ: COMPLEX / Entity ID: #1-#9 / 由来: RECOMBINANT
分子量値: 1.1 MDa / 実験値: NO
由来(天然)生物種: Homo sapiens (ヒト)
由来(組換発現)生物種: Homo sapiens (ヒト)
緩衝液pH: 8
緩衝液成分
ID濃度名称式Buffer-ID
120 mMBicineビシンC6H13NO41
2150 mMsodium chloride塩化ナトリウムNaCl塩化ナトリウム1
31 mMDithiothreitolジチオトレイトールC4H10O2S21
試料濃度: 1 mg/ml / 包埋: NO / シャドウイング: NO / 染色: NO / 凍結: YES
急速凍結凍結剤: ETHANE

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電子顕微鏡撮影

実験機器
モデル: Titan Krios / 画像提供: FEI Company
顕微鏡モデル: FEI TITAN KRIOS
電子銃電子線源: FIELD EMISSION GUN / 加速電圧: 300 kV / 照射モード: FLOOD BEAM
電子レンズモード: BRIGHT FIELDBright-field microscopy
撮影電子線照射量: 65 e/Å2 / 検出モード: SUPER-RESOLUTION
フィルム・検出器のモデル: GATAN K2 SUMMIT (4k x 4k)

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解析

ソフトウェア名称: REFMAC / バージョン: 5.8.0267 / 分類: 精密化
CTF補正タイプ: PHASE FLIPPING AND AMPLITUDE CORRECTION
3次元再構成解像度: 3.1 Å / 解像度の算出法: FSC 0.143 CUT-OFF / 粒子像の数: 671972 / 対称性のタイプ: POINT
精密化解像度: 3.1→20 Å / Cor.coef. Fo:Fc: 0.876 / SU B: 24.192 / SU ML: 0.18 / ESU R: 0.235
立体化学のターゲット値: MAXIMUM LIKELIHOOD WITH PHASES
詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor反射数%反射
Rwork0.30028 --
obs0.30028 1273223 99.63 %
溶媒の処理イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1 Å / 溶媒モデル: BABINET MODEL WITH MASK
原子変位パラメータBiso mean: 58.035 Å2
Baniso -1Baniso -2Baniso -3
1--0.29 Å2-0.73 Å20.05 Å2
2---0.93 Å20.11 Å2
3---1.21 Å2
精密化ステップサイクル: 1 / 合計: 64462
拘束条件
Refine-IDタイプDev idealDev ideal target数
ELECTRON MICROSCOPYr_bond_refined_d0.0130.01365804
ELECTRON MICROSCOPYr_bond_other_d0.0340.01763715
ELECTRON MICROSCOPYr_angle_refined_deg1.5781.63289220
ELECTRON MICROSCOPYr_angle_other_deg2.271.571146650
ELECTRON MICROSCOPYr_dihedral_angle_1_deg8.3658134
ELECTRON MICROSCOPYr_dihedral_angle_2_deg32.45921.6123300
ELECTRON MICROSCOPYr_dihedral_angle_3_deg16.511511427
ELECTRON MICROSCOPYr_dihedral_angle_4_deg18.06515480
ELECTRON MICROSCOPYr_chiral_restr0.0910.28485
ELECTRON MICROSCOPYr_gen_planes_refined0.0070.0273261
ELECTRON MICROSCOPYr_gen_planes_other0.0070.0214951
ELECTRON MICROSCOPYr_nbd_refined
ELECTRON MICROSCOPYr_nbd_other
ELECTRON MICROSCOPYr_nbtor_refined
ELECTRON MICROSCOPYr_nbtor_other
ELECTRON MICROSCOPYr_xyhbond_nbd_refined
ELECTRON MICROSCOPYr_xyhbond_nbd_other
ELECTRON MICROSCOPYr_metal_ion_refined
ELECTRON MICROSCOPYr_metal_ion_other
ELECTRON MICROSCOPYr_symmetry_vdw_refined
ELECTRON MICROSCOPYr_symmetry_vdw_other
ELECTRON MICROSCOPYr_symmetry_hbond_refined
ELECTRON MICROSCOPYr_symmetry_hbond_other
ELECTRON MICROSCOPYr_symmetry_metal_ion_refined
ELECTRON MICROSCOPYr_symmetry_metal_ion_other
ELECTRON MICROSCOPYr_mcbond_it5.0110.12932788
ELECTRON MICROSCOPYr_mcbond_other5.00910.12932787
ELECTRON MICROSCOPYr_mcangle_it8.950.54740838
ELECTRON MICROSCOPYr_mcangle_other8.950.54840839
ELECTRON MICROSCOPYr_scbond_it4.90710.52933016
ELECTRON MICROSCOPYr_scbond_other4.90710.52933017
ELECTRON MICROSCOPYr_scangle_it
ELECTRON MICROSCOPYr_scangle_other9.08552.12648383
ELECTRON MICROSCOPYr_long_range_B_refined15.02873945
ELECTRON MICROSCOPYr_long_range_B_other15.02973946
ELECTRON MICROSCOPYr_rigid_bond_restr
ELECTRON MICROSCOPYr_sphericity_free
ELECTRON MICROSCOPYr_sphericity_bonded
LS精密化 シェル解像度: 3.1→3.179 Å / Total num. of bins used: 20
Rfactor反射数%反射
Rfree0 0 -
Rwork0.626 92364 -
obs--100 %
精密化 TLS

手法: refined / Refine-ID: ELECTRON MICROSCOPY

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
125.5947-16.541211.178834.5945-0.94376.6858-0.3358-2.0929-1.01930.84760.01172.63050.0704-0.96420.32410.8946-0.24670.421.03450.31620.620760.0013216.778394.1245
26.2102-7.4574-3.044511.0331.45048.36520.0375-0.508-0.56090.15710.06020.92720.73990.1963-0.09780.4958-0.18720.13170.6070.18630.397471.7602211.626783.0579
310.7569-8.70265.672922.47392.270815.8541-0.70270.04420.58081.7062-0.22330.2346-0.0058-0.18040.9260.6483-0.17470.32460.45870.04990.326268.2148226.36294.3513
47.2983-5.16221.05567.45071.71779.38070.2035-0.3211-0.15780.2506-0.02220.4021-0.13990.0401-0.18130.549-0.20.22430.61810.08850.317974.3926220.794580.435
52.8802-1.6904-5.00992.31052.98578.73450.0022-0.41810.28360.45080.4139-0.4530.10250.7232-0.41610.4995-0.20410.0860.7619-0.09730.472885.8525229.274381.5899
61.01533.49221.035629.638513.29286.575-0.21960.13910.0554-0.44820.50320.0093-0.18990.3596-0.28360.4622-0.12050.05880.5295-0.15980.647385.1359210.793457.8505
729.7609-19.9089-38.779625.117231.044652.7405-0.8656-1.7644-0.31450.06950.6808-0.28080.91972.11420.18480.28650.041-0.17780.6338-0.04180.819489.1937196.459158.838
84.47540.65930.67610.58910.61291.3345-0.1554-0.11580.30740.1408-0.02350.0593-0.0863-0.04210.17890.532-0.04380.07820.4916-0.04630.519459.7642205.317859.0541
93.9396-0.9741-0.43380.2798-0.25643.51830.29530.9007-0.252-0.0641-0.26060.0602-0.08170.052-0.03460.57120.0380.18890.6179-0.05880.507243.4296197.406338.882
105.3806-7.57041.622627.3756-5.887310.78461.04110.2058-0.6795-0.63040.5381-1.50371.01910.085-1.57920.9015-0.0538-0.04780.2669-0.24831.093137.0747181.70546.5174
118.5708-0.5854-1.29698.5052-4.66029.7303-0.09370.1519-0.75150.32210.52230.2137-0.5717-0.246-0.42860.5471-0.11720.12140.4435-0.0790.547440.3554194.85650.1942
1218.8483-2.55610.98284.47920.03631.11010.1870.61020.4150.4055-0.2626-0.0122-0.0134-0.15740.07550.52010.06070.17530.6375-0.08380.336826.5681201.73141.9208
132.3934-0.9131-1.20412.1437-2.17485.1854-0.304-0.5592-0.20450.21120.30610.27850.0441-0.6967-0.00210.4711-0.05320.1680.9663-0.20780.599318.7985200.912250.7394
145.20671.5898-1.81175.6229-0.24224.983-0.1639-0.26410.49590.166-0.20930.2496-0.4582-0.47110.37320.55620.14630.29620.5009-0.16580.525527.8778215.303653.6315
1511.25080.1687.33653.11642.597818.99720.0723-0.34880.0276-0.1566-0.0463-0.23010.75570.3693-0.0260.47910.02550.11770.51150.0080.538283.427182.70750.3321
166.3009-2.4766-3.066614.76883.62829.6888-0.2517-0.14660.2055-0.19190.0579-0.0361-0.23880.46750.19380.483-0.0230.17660.5178-0.01050.397471.5847190.48943.899
172.56267.06164.173739.5747-7.299828.7890.06850.6703-0.6031-1.89831.6922-0.1110.94871.2019-1.76070.64990.0575-0.12490.7171-0.19490.556970.4934182.172433.7562
1814.0269-0.749113.67130.0787-0.180527.4534-0.15850.355-0.84940.110.03820.13161.26840.21470.12030.663-0.04150.10910.420.07780.430772.4945175.507950.938
1911.9562-0.471218.823123.691528.866766.751-1.2354-1.40490.22341.36540.75310.1627-0.2364-1.08050.48230.73150.1429-0.00410.97590.01930.436381.4001179.656669.3912
206.3171-6.69226.22557.4281-6.06167.1490.10320.0459-0.13360.1529-0.22920.19790.62920.01160.1260.5735-0.07220.07470.5583-0.00440.573969.8497186.177654.4193
2110.6409-1.2833.72075.44920.40822.86580.03820.0523-0.16510.142-0.29520.61451.0351-0.4770.2570.7374-0.23620.08960.497-0.06790.647460.6673177.377450.9699
2225.47773.6737-3.595819.1054.099940.49810.2326-1.1397-0.50571.7486-0.44040.40880.82090.40690.20790.6276-0.01720.2310.41210.06190.405465.5222182.95367.3613
232.09772.9892-1.996112.2260.12493.01230.083-0.10820.26120.6770.28080.15940.17720.2711-0.36380.6936-0.02410.01130.49710.04060.620358.6852186.335458.5067
242.00816.61956.420234.8113.72144.54930.8113-0.29130.14242.5929-0.10720.83412.8793-2.2919-0.70410.4683-0.31990.09840.5584-0.04050.909750.6768179.943859.8611
254.7521-1.32030.90542.26411.22886.0677-0.0923-1.0482-0.26370.2783-0.11610.2111-0.0007-0.24890.20840.7151-0.06690.30050.71780.00720.419243.1717196.599266.7309
261.0064-0.1954-1.02113.71121.23621.51160.3711-0.01450.2108-0.38110.2206-0.3592-0.57790.1768-0.59170.5619-0.15950.33790.5837-0.04190.629686.0495236.660567.1533
275.7988-5.3046-1.22424.95531.1830.34960.4724-0.05810.4626-0.454-0.1147-0.6096-0.08630.0737-0.35770.3489-0.01070.21350.6526-0.13980.8193115.2521212.519951.4037
284.09211.35951.11873.56050.1365.4851-0.1969-0.13660.14450.5083-0.2651-0.7746-0.3085-0.16920.4620.7395-0.0183-0.17130.18430.09520.611188.6311163.117469.5721
296.4539-4.06722.00295.8494-2.05664.1191-0.0146-0.0732-0.4713-0.2021-0.37490.79870.262-0.20530.38960.69050.28490.26150.5187-0.40730.819161.4756159.273639.3389
304.1967-0.9001-0.16356.8292-0.12043.92770.59680.5359-0.305-0.4056-0.3992-0.1647-0.24420.1581-0.19760.44930.17510.21930.6335-0.10980.295850.8411190.279826.1553
317.2489-0.64952.70112.05570.45226.48480.0961.44890.0043-0.5408-0.0801-0.74290.07590.8541-0.01590.568-0.1240.28830.87240.11880.547382.2069196.353333.8412
323.40061.05240.79894.8409-0.623.87820.3465-0.41790.051.0517-0.2883-0.1448-0.5019-0.5217-0.05811.02120.19710.20540.55150.46440.477555.967695.2817150.5264
330.44941.0611-0.76795.1178-2.82381.70370.16920.29240.10060.28750.10780.4914-0.2586-0.2598-0.2770.82180.0738-0.32431.0213-0.13540.591492.75988.5038172.6171
342.75961.05830.64920.44960.24810.15960.08960.62210.34150.1122-0.04920.05410.06920.1825-0.04041.3801-0.17820.30041.3750.15970.895595.988688.855205.4922
352.33210.5243-0.12254.559-1.46041.09570.2019-0.3505-0.48110.2558-0.1501-0.4720.4226-0.0181-0.05180.5599-0.0315-0.28630.45220.30070.5994153.0246132.131560.5568
362.6965-1.49270.36925.20880.68450.5669-0.0499-0.24150.36570.30690.0708-0.37730.02-0.0588-0.02090.35520.0210.04830.4804-0.00220.6827143.9382180.133350.862
376.36970.29494.24691.45020.22972.89920.03030.46090.0128-0.0050.00410.0795-0.01590.1242-0.03440.1068-0.0226-0.26670.68690.51220.9839196.0536147.965866.9948
384.3836-0.80390.47671.10080.86432.00420.1150.06040.1242-0.07470.3995-0.1539-0.05760.2206-0.51440.3497-0.1118-0.34050.46490.42150.9541235.4968147.23294.3708
397.5222-1.81911.43433.0836-1.85415.8548-0.6749-0.01690.56380.0542-0.19240.2349-0.3817-0.40990.86730.704-0.0258-0.22870.59940.44220.9266240.566160.3934156.8842
400.8478-0.64170.89621.4016-0.91933.2087-0.08130.06380.083800.0226-0.1204-0.0771-0.18960.05870.2647-0.1366-0.11570.66590.60180.7226224.918135.3642135.2204
412.5041.30930.38891.04740.48934.76760.3168-0.1247-0.19730.411-0.114-0.07770.20180.0856-0.20280.5386-0.148-0.07680.53690.6370.8121248.5366133.4664176.9128
425.34030.83670.12460.99221.34712.59920.27610.12760.14630.067-0.0067-0.1773-0.60940.0494-0.26950.8126-0.08720.07580.57350.61690.7235267.1414157.4318176.1694
431.18411.74290.64913.50350.49670.72560.0709-0.0823-0.00350.3057-0.0165-0.04340.13580.0083-0.05440.32290.0701-0.07360.68250.28170.5693122.80789.7969129.4082
448.54581.2506-1.10832.3914-0.4571.47650.15-0.3153-0.0979-0.0154-0.048-0.2123-0.2022-0.1506-0.1020.20190.0758-0.15090.8170.41660.4706163.6949106.2773156.5315
451.9687-0.04120.80435.3512.30211.8850.25530.69470.3557-0.3666-0.0157-1.179-0.22360.3301-0.23960.3851-0.04390.09160.60110.21670.7036134.6381136.7186121.0867
462.97931.2802-0.13241.131-0.12797.48280.1695-0.32670.33440.27740.216-0.4882-0.61980.1014-0.38540.69610.1008-0.59350.236-0.41641.0611138.856159.1401149.0714
470.7038-1.3430.81353.3817-2.48682.00710.6656-0.2927-0.0821-0.9054-0.21610.46470.37590.5615-0.44951.4102-0.3719-0.16430.9627-0.36910.3175144.7938171.9526174.8104
482.3105-1.13610.07413.20850.85760.4281-0.0231-0.28620.3657-0.2285-0.1482-0.1377-0.0984-0.09560.17120.4223-0.0429-0.24840.51440.41730.7371208.9447152.2446177.3834
493.38840.3181-1.09632.89231.26361.05580.0891-0.31550.09380.0817-0.0201-0.00860.1121-0.0138-0.06890.2468-0.1771-0.16770.73390.54760.7401222.9695107.2693166.4687
505.63890.9775-0.82092.1702-0.94121.0177-0.02930.0289-0.3174-0.30590.1370.20960.0971-0.0488-0.10770.2317-0.1178-0.2130.53420.60470.8325198.802793.4781155.0577
512.1842-0.4290.00954.4841.06071.5597-0.38630.2453-0.75490.53890.3497-0.2229-0.06870.04920.03670.43690.30950.34320.44490.18240.705698.7549110.03237.3759
523.5626-0.4034-1.06553.07770.2655.7152-0.06980.09120.27470.4595-0.11060.91190.5430.10560.18030.44230.25210.38980.37730.12930.701384.3446124.323345.1041
534.5472-2.3045.89881.3274-3.32929.7481-0.03170.2660.28160.0752-0.3102-0.2658-0.31950.26790.34190.67450.13380.05030.41170.10320.550389.5343145.607658.853
5427.10114.63972.632819.19182.38368.57280.31061.0601-1.0483-0.2648-0.0387-0.9538-0.10840.376-0.2720.47920.18650.02920.37860.0860.182799.7382117.792588.7997
557.49480.5936-2.42381.1962-1.87743.49950.6486-1.33380.1830.0301-0.4423-0.1111-0.3861.065-0.20630.5446-0.18590.0070.7703-0.01830.8663110.581131.713398.7819
5636.44378.185634.814814.675211.502743.75630.2498-1.46350.44670.1476-1.07310.04320.7464-1.95490.82330.41640.02350.24160.27270.17230.339194.5014128.325591.781
5731.624112.2246-25.952221.32-6.352127.51910.37951.43412.0632-1.14960.96991.1534-0.1387-2.194-1.34940.8268-0.0267-0.2141.00130.01140.445580.1417127.995483.7594
5839.6818-16.454910.181715.6413-7.30335.95551.3448-1.3110.6587-0.5627-0.48390.310.5440.0164-0.86090.54210.0214-0.00490.2653-0.04910.363896.3874121.473397.629
5919.3616-14.12645.992947.1919-17.647615.88040.18160.27020.9971-0.6332-1.0379-2.78610.03450.71540.85630.12550.0172-0.03460.6847-0.02660.8412120.5497116.7999.4439
608.3081-0.01542.06045.7004-1.31583.80610.27860.18110.1229-0.4101-0.29270.35430.04660.10340.01410.51160.04780.11950.28080.17150.300693.7343122.488988.8893
6129.5587-19.370410.389414.5609-1.056421.4926-0.6759-2.2982.00220.38791.1162-1.6357-0.3088-1.7332-0.44030.7688-0.175-0.14970.6877-0.15030.6236103.125141.0235102.9494
620.48611.10971.753312.25574.48096.8906-0.01270.27590.0238-0.91780.1489-0.3659-0.31190.4768-0.13620.40390.13250.1190.68610.14050.477296.1078119.555782.6593
635.311110.92476.842822.641914.12338.8341-0.18630.4105-0.1238-0.20240.5074-0.6065-0.06580.4748-0.32111.46140.3263-0.02340.5950.56250.9124103.8087102.16188.157
643.0832-0.1996.08174.4858-5.298826.772-0.00110.14520.3220.0634-0.15190.0632-0.46711.20610.1530.34350.10750.04190.33840.13930.4429103.406111.1519101.9886
656.19140.5642-0.15915.494-0.16353.56980.17180.1136-0.4384-0.13530.0238-0.1480.82510.5061-0.19560.35820.1936-0.04370.58080.16390.6302112.3202100.0185107.8452
667.24420.66421.57072.7804-0.6998.91270.2789-0.3946-0.3643-0.1768-0.0151-0.24330.35460.1868-0.26370.32840.22630.0470.36480.14580.4644104.7324104.3182106.9992
671.48213.25251.764210.88985.01332.4909-0.2986-0.00820.0523-0.0830.3252-0.0507-0.12970.2217-0.02650.45760.0621-0.02050.56440.03590.4975107.9331119.6521120.5077
681.15072.60862.34376.01095.17545.3497-0.0930.571-0.239-0.10491.2277-0.31970.03421.1143-1.13470.5359-0.12030.10110.5333-0.27211.1615119.1858163.4947135.9423
696.15933.707-2.162720.17411.50011.43850.19620.8364-0.1377-0.176-0.2306-0.2226-0.2189-0.12750.03440.5663-0.0132-0.11270.53470.12540.3931103.5446136.0078120.2925
707.77370.77760.14082.6399-0.04691.42530.0010.3565-0.1414-0.01380.0171-0.40070.17740.0388-0.0180.24470.0220.07450.4092-0.05080.7539116.7712132.0135.8898
715.26592.1588-1.74039.6874-3.8162.467-0.1470.6624-0.5758-0.6550.0744-1.34820.12930.40740.07260.1997-0.01110.1090.5738-0.30180.9906129.182127.596234.7853
726.4239-1.24421.87138.6529-5.125725.63570.29760.2602-0.23840.78-0.0135-0.3742-0.3718-0.0828-0.28420.1803-0.0555-0.20210.3323-0.06390.7829132.034141.511748.0004
733.90380.0262-0.36326.9469-1.61361.48680.00750.2532-0.1198-0.00870.1021-0.4133-0.07110.1946-0.10960.1809-0.0025-0.19820.4751-0.08760.7682131.406143.574344.4235
746.98712.35470.29854.1587-1.49330.77570.1412-0.04640.06640.4073-0.08150.124-0.15390.091-0.05970.36130.041-0.12840.4646-0.11020.7107129.4547154.255149.9838
756.68393.121-1.39845.4347-1.00772.75630.03180.25850.88080.60840.27810.6706-0.11880.0703-0.30990.29150.03150.09350.4609-0.07470.8043113.3205157.690448.2896
766.26026.7209-3.57814.53842.11946.99690.21940.20050.32980.1410.01490.5137-0.3074-0.1928-0.23430.24520.0530.04750.4997-0.04460.7031105.0532147.379844.0492
773.77572.7533-0.652111.03035.7397.5774-0.24480.40230.47450.00690.38080.2163-0.00510.0396-0.1360.09140.10590.01760.38590.07150.7355103.8018150.490942.4702
783.064-5.36572.120421.1701-11.240315.1188-0.11530.3464-0.07-0.5786-0.1523-0.33690.59380.77480.26760.2346-0.0046-0.00540.5109-0.03640.6865104.5091135.902735.8665
798.8988-4.0212-0.53311.83160.30962.48870.32371.0013-0.4314-0.2182-0.48190.1469-0.4082-0.17040.15820.64550.168-0.14890.7053-0.30610.807677.4289143.494229.1026
801.2954-0.19131.39360.13450.757715.4671-0.34790.0131-0.0062-0.027-0.1770.0315-0.6356-0.56290.5250.920.15090.06990.42690.06950.601283.3504145.277471.3949
812.3155-1.18730.03985.4012-6.1417.92740.2339-0.3386-0.0306-0.36630.22590.55020.1856-0.1799-0.45980.62810.1222-0.08250.5342-0.05050.676478.9218129.7688108.5445
820.1502-0.3966-0.74533.4492-0.81615.86910.10830.2152-0.0119-0.5609-0.21-0.17880.1235-0.41890.10170.4411-0.00550.00490.57470.07080.611985.1197139.418991.507
8334.6111-30.47833.887447.48923.88643.0323-0.6336-0.5964-1.60680.13041.0040.8408-0.28460.0405-0.37040.83470.1222-0.00290.80570.18170.4095103.7842124.3788109.6006
846.8181-0.451-6.17236.13151.22165.7513-0.10460.61630.6301-0.36960.54730.5990.1158-0.6645-0.44270.3402-0.05650.03940.74580.07410.490882.8081132.931996.7789
859.7458-2.95931.665615.328715.524218.09280.94290.9718-0.95640.36530.217-0.57430.91560.7615-1.161.1099-0.066-0.13710.68120.18480.83389.2772121.5228113.5778
866.00930.5444-3.85874.2011-12.963448.0344-1.5507-0.38021.35040.1483-0.2411-0.63190.1913-1.51831.79190.78350.0731-0.1290.7637-0.16880.641590.8074135.985498.9335
876.43076.88875.77388.91830.767324.6557-0.20230.0348-0.3797-0.75030.1777-0.42841.0732-0.06180.02451.0960.1321-0.05290.6560.10250.514493.2866135.650477.6823
885.29971.4207-6.88691.7142-6.378224.4761-0.0991-0.65830.4009-0.0361-0.0234-0.1093-0.13440.33270.12250.7798-0.05560.04810.24030.02170.593889.0089137.7402107.1914
893.2162-2.852-1.44058.15852.36780.8619-0.2054-0.1611-0.35891.3027-0.08920.73610.33710.00690.29450.5835-0.0354-0.02220.79630.21530.377690.9313120.1763125.976
909.40080.14843.37377.6954-2.74232.3009-0.3598-0.40731.15690.45140.09331.0431-0.3777-0.24580.26650.37660.2034-0.0520.6679-0.01710.791481.9666148.5565124.6571
918.29324.4425-2.52414.536110.212911.90020.0176-0.1917-0.02021.43150.0328-0.21971.4017-0.0869-0.05040.383-0.0238-0.13880.7276-0.00310.584884.7849132.6436127.8349
9244.147934.401916.173328.189113.06466.7286-0.82411.34221.74820.41210.95151.52430.04620.7537-0.12740.8430.08660.12270.8099-0.17121.036395.6336153.8809137.3497
936.34-1.5547-2.81077.26551.222810.51360.1284-0.44510.1869-0.91930.03450.19590.3629-0.5591-0.1630.3472-0.023-0.07260.52890.1220.48192.9367137.1643125.7487
949.19810.4895.13992.57780.44736.48570.2159-0.35561.3961-0.27030.2169-0.1342-0.2521-0.1071-0.43280.6023-0.0116-0.01320.2163-0.06690.94103.8765153.4964128.6353
957.3362-4.2692-0.18454.74551.00631.197-0.3856-0.94160.1130.38140.68660.06010.33270.2491-0.30090.58140.0445-0.2090.48720.04590.5059110.8227131.3387129.5844
963.0834-0.8045-1.31843.5085-1.21493.0675-0.22930.108-0.1125-0.09330.11470.27330.34350.40880.11460.24440.0275-0.25210.6940.2950.485191.792342.0498144.7778
973.8097-2.97242.54112.5655-2.1154.1805-0.1161-0.4903-0.22470.32640.4405-0.1218-0.30720.0405-0.32440.60930.2154-0.17430.78160.44790.854275.425686.2894143.1823
983.96661.814-0.19692.16580.64524.40750.0962-0.0953-0.3088-0.03740.06940.03750.4944-0.095-0.16560.50230.11680.10110.40010.25390.542973.634294.8445105.402
994.58361.12421.37796.2872-1.88184.2357-0.67550.2544-0.064-0.61880.58480.59250.26370.04430.09070.6676-0.08050.06260.39010.0640.476375.8446101.828679.5079
1005.61730.0556-1.77984.3193.01874.28890.00650.723-0.5107-0.3291-0.46140.64820.0964-0.39380.45490.414-0.0989-0.20730.58450.13420.550739.6987109.949387.4341
1013.0539-0.1949-0.83162.0170.49182.6037-0.21580.14280.00670.29250.05150.5166-0.1802-0.07080.16430.3130.1853-0.20250.41030.1851.040561.128558.303160.3199
1021.90830.3855-0.40184.8441-1.63152.9239-0.074-0.13450.31240.331-0.2780.1718-0.27510.1310.35190.35870.08030.09390.52070.09630.535164.9064114.0644111.8766
1035.94070.08721.30352.51741.45243.7167-0.5306-0.18530.8527-0.2403-0.12340.643-0.7819-0.35360.6540.61240.1074-0.23770.21040.20750.834743.3612126.6871100.6721
精密化 TLSグループ
IDRefine-IDRefine TLS-IDAuth asym-IDAuth seq-ID
1ELECTRON MICROSCOPY1C1 - 14
2ELECTRON MICROSCOPY2C15 - 49
3ELECTRON MICROSCOPY3C50 - 70
4ELECTRON MICROSCOPY4C71 - 94
5ELECTRON MICROSCOPY5C95 - 144
6ELECTRON MICROSCOPY6C145 - 169
7ELECTRON MICROSCOPY7C170 - 178
8ELECTRON MICROSCOPY8C179 - 326
9ELECTRON MICROSCOPY9C327 - 378
10ELECTRON MICROSCOPY10C379 - 390
11ELECTRON MICROSCOPY11C391 - 400
12ELECTRON MICROSCOPY12C401 - 425
13ELECTRON MICROSCOPY13C426 - 483
14ELECTRON MICROSCOPY14C484 - 558
15ELECTRON MICROSCOPY15E12 - 25
16ELECTRON MICROSCOPY16E26 - 47
17ELECTRON MICROSCOPY17E48 - 59
18ELECTRON MICROSCOPY18E60 - 72
19ELECTRON MICROSCOPY19E73 - 83
20ELECTRON MICROSCOPY20E84 - 104
21ELECTRON MICROSCOPY21E105 - 120
22ELECTRON MICROSCOPY22E121 - 130
23ELECTRON MICROSCOPY23E131 - 142
24ELECTRON MICROSCOPY24E143 - 154
25ELECTRON MICROSCOPY25E155 - 181
26ELECTRON MICROSCOPY26F1 - 183
27ELECTRON MICROSCOPY27F184 - 355
28ELECTRON MICROSCOPY28L1 - 103
29ELECTRON MICROSCOPY29L104 - 197
30ELECTRON MICROSCOPY30L198 - 296
31ELECTRON MICROSCOPY31L297 - 402
32ELECTRON MICROSCOPY32M1 - 103
33ELECTRON MICROSCOPY33M104 - 197
34ELECTRON MICROSCOPY34M198 - 296
35ELECTRON MICROSCOPY35G12 - 342
36ELECTRON MICROSCOPY35S32 - 55
37ELECTRON MICROSCOPY36G343 - 610
38ELECTRON MICROSCOPY36S19 - 31
39ELECTRON MICROSCOPY37S56 - 246
40ELECTRON MICROSCOPY38S265 - 524
41ELECTRON MICROSCOPY39S542 - 627
42ELECTRON MICROSCOPY40S648 - 1033
43ELECTRON MICROSCOPY41S1043 - 1215
44ELECTRON MICROSCOPY42S1216 - 1443
45ELECTRON MICROSCOPY43H12 - 386
46ELECTRON MICROSCOPY43A29 - 55
47ELECTRON MICROSCOPY44H387 - 610
48ELECTRON MICROSCOPY44A19 - 28
49ELECTRON MICROSCOPY45A56 - 248
50ELECTRON MICROSCOPY46A249 - 401
51ELECTRON MICROSCOPY47A402 - 524
52ELECTRON MICROSCOPY48A648 - 1034
53ELECTRON MICROSCOPY49A1043 - 1215
54ELECTRON MICROSCOPY50A1216 - 1443
55ELECTRON MICROSCOPY51B7 - 254
56ELECTRON MICROSCOPY52B255 - 369
57ELECTRON MICROSCOPY53B385 - 476
58ELECTRON MICROSCOPY54B477 - 493
59ELECTRON MICROSCOPY55B494 - 502
60ELECTRON MICROSCOPY56B503 - 511
61ELECTRON MICROSCOPY57B512 - 518
62ELECTRON MICROSCOPY58B519 - 531
63ELECTRON MICROSCOPY59B532 - 574
64ELECTRON MICROSCOPY60B575 - 601
65ELECTRON MICROSCOPY61B602 - 612
66ELECTRON MICROSCOPY62B613 - 634
67ELECTRON MICROSCOPY63B635 - 644
68ELECTRON MICROSCOPY64B645 - 663
69ELECTRON MICROSCOPY65B664 - 687
70ELECTRON MICROSCOPY66B688 - 735
71ELECTRON MICROSCOPY67B736 - 770
72ELECTRON MICROSCOPY68B771 - 837
73ELECTRON MICROSCOPY69B838 - 859
74ELECTRON MICROSCOPY70P5 - 86
75ELECTRON MICROSCOPY71P87 - 130
76ELECTRON MICROSCOPY72P131 - 155
77ELECTRON MICROSCOPY73P156 - 217
78ELECTRON MICROSCOPY74P218 - 280
79ELECTRON MICROSCOPY75P281 - 346
80ELECTRON MICROSCOPY76P347 - 371
81ELECTRON MICROSCOPY77P372 - 418
82ELECTRON MICROSCOPY78P419 - 433
83ELECTRON MICROSCOPY79P434 - 457
84ELECTRON MICROSCOPY80P458 - 509
85ELECTRON MICROSCOPY81P510 - 531
86ELECTRON MICROSCOPY82P532 - 548
87ELECTRON MICROSCOPY83P549 - 557
88ELECTRON MICROSCOPY84P558 - 584
89ELECTRON MICROSCOPY85P585 - 593
90ELECTRON MICROSCOPY86P594 - 605
91ELECTRON MICROSCOPY87P606 - 636
92ELECTRON MICROSCOPY88P637 - 654
93ELECTRON MICROSCOPY89P655 - 709
94ELECTRON MICROSCOPY90P710 - 754
95ELECTRON MICROSCOPY91P755 - 768
96ELECTRON MICROSCOPY92P769 - 784
97ELECTRON MICROSCOPY93P785 - 808
98ELECTRON MICROSCOPY94P809 - 836
99ELECTRON MICROSCOPY95P837 - 881
100ELECTRON MICROSCOPY96O7 - 369
101ELECTRON MICROSCOPY97O391 - 432
102ELECTRON MICROSCOPY97Q449 - 500
103ELECTRON MICROSCOPY98O471 - 655
104ELECTRON MICROSCOPY99O656 - 749
105ELECTRON MICROSCOPY99Q669 - 685
106ELECTRON MICROSCOPY100O750 - 859
107ELECTRON MICROSCOPY100Q823 - 881
108ELECTRON MICROSCOPY101Q5 - 435
109ELECTRON MICROSCOPY102Q501 - 668
110ELECTRON MICROSCOPY103Q701 - 822

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万見について

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お知らせ

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2022年2月9日: EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

EMDBエントリの付随情報ファイルのフォーマットが新しくなりました

  • EMDBのヘッダファイルのバージョン3が、公式のフォーマットとなりました。
  • これまでは公式だったバージョン1.9は、アーカイブから削除されます。

関連情報:EMDBヘッダ

外部リンク:wwPDBはEMDBデータモデルのバージョン3へ移行します

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2020年8月12日: 新型コロナ情報

新型コロナ情報

URL: https://pdbj.org/emnavi/covid19.php

新ページ: EM Navigatorに新型コロナウイルスの特設ページを開設しました。

関連情報:Covid-19情報 / 2020年3月5日: 新型コロナウイルスの構造データ

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2020年3月5日: 新型コロナウイルスの構造データ

新型コロナウイルスの構造データ

関連情報:万見生物種 / 2020年8月12日: 新型コロナ情報

外部リンク:COVID-19特集ページ - PDBj / 今月の分子2020年2月：コロナウイルスプロテーアーゼ

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2019年1月31日: EMDBのIDの桁数の変更

EMDBのIDの桁数の変更

  • EMDBエントリに付与されているアクセスコード(EMDB-ID)は4桁の数字(例、EMD-1234)でしたが、間もなく枯渇します。これまでの4桁のID番号は4桁のまま変更されませんが、4桁の数字を使い切った後に発行されるIDは5桁以上の数字(例、EMD-12345)になります。5桁のIDは2019年の春頃から発行される見通しです。
  • EM Navigator/万見では、接頭語「EMD-」は省略されています。

関連情報:Q: 「EMD」とは何ですか？ / 万見/EM NavigatorにおけるID/アクセスコードの表記

外部リンク:EMDB Accession Codes are Changing Soon! / PDBjへお問い合わせ

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2017年7月12日: PDB大規模アップデート

PDB大規模アップデート

  • 新バージョンのPDBx/mmCIF辞書形式に基づくデータがリリースされました。
  • 今回の更新はバージョン番号が4から5になる大規模なもので、全エントリデータの書き換えが行われる「Remediation」というアップデートに該当します。
  • このバージョンアップで、電子顕微鏡の実験手法に関する多くの項目の書式が改定されました(例：em_softwareなど)。
  • EM NavigatorとYorodumiでも、この改定に基づいた表示内容になります。

外部リンク:wwPDB Remediation / OneDepデータ基準に準拠した、より強化された内容のモデル構造ファイルが、PDBアーカイブで公開されました。

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万見 (Yorodumi)

幾万の構造データを、幾万の視点から

  • 万見(Yorodumi)は、EMDB/PDB/SASBDBなどの構造データを閲覧するためのページです。
  • EM Navigatorの詳細ページの後継、Omokage検索のフロントエンドも兼ねています。

関連情報:EMDB / PDB / SASBDB / 3つのデータバンクの比較 / 万見検索 / 2016年8月31日: 新しいEM Navigatorと万見 / 万見文献 / Jmol/JSmol / 機能・相同性情報 / 新しいEM Navigatorと万見の変更点

他の情報も見る