[English] 日本語
Yorodumi
- EMDB-72933: Babesia divergens ribosome structure by single-particle cryo-EM (... -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: EMDB / ID: EMD-72933
TitleBabesia divergens ribosome structure by single-particle cryo-EM (3D class3, E-site tRNA)
Map data
Sample
  • Complex: 80S ribosome
    • RNA: x 5 types
    • Protein or peptide: x 75 types
  • Ligand: x 4 types
KeywordstRNAs / RNA modification / 80S / RIBOSOME
Function / homology
Function and homology information


preribosome / 90S preribosome / protein-RNA complex assembly / translation regulator activity / ribosomal large subunit biogenesis / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / chloroplast / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of SSU-rRNA / small-subunit processome ...preribosome / 90S preribosome / protein-RNA complex assembly / translation regulator activity / ribosomal large subunit biogenesis / maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / chloroplast / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) / maturation of SSU-rRNA / small-subunit processome / kinase activity / rRNA processing / large ribosomal subunit / ribosomal small subunit assembly / ribosome biogenesis / ribosome binding / ribosomal small subunit biogenesis / 5S rRNA binding / ribosomal large subunit assembly / small ribosomal subunit / small ribosomal subunit rRNA binding / large ribosomal subunit rRNA binding / cytosolic small ribosomal subunit / cytosolic large ribosomal subunit / cytoplasmic translation / negative regulation of translation / rRNA binding / structural constituent of ribosome / ribosome / translation / ribonucleoprotein complex / mRNA binding / nucleolus / RNA binding / zinc ion binding / nucleus / cytoplasm / cytosol
Similarity search - Function
: / Ribosomal protein L23 / Ribosomal protein L2, archaeal-type / Ribosomal protein L1 / Ribosomal protein L1, 3-layer alpha/beta-sandwich / : / Ribosomal protein S26e signature. / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal protein S21e, conserved site ...: / Ribosomal protein L23 / Ribosomal protein L2, archaeal-type / Ribosomal protein L1 / Ribosomal protein L1, 3-layer alpha/beta-sandwich / : / Ribosomal protein S26e signature. / Ribosomal protein L13e, conserved site / Ribosomal protein L13e signature. / Ribosomal protein S21e, conserved site / Ribosomal protein S21e signature. / Ribosomal protein S26e / Ribosomal protein L29e / Ribosomal protein S26e superfamily / Ribosomal protein S26e / Ribosomal L29e protein family / Ribosomal protein S12e / Ribosomal protein L1-like / Ribosomal protein L1/ribosomal biogenesis protein / Ribosomal protein L1p/L10e family / Ribosomal protein L22e / Ribosomal protein L22e superfamily / Ribosomal L22e protein family / Small (40S) ribosomal subunit Asc1/RACK1 / Ribosomal protein L13e / Ribosomal protein L13e / Ribosomal protein L38e / Ribosomal protein S5, eukaryotic/archaeal / Ribosomal protein L38e superfamily / Ribosomal L38e protein family / Ribosomal protein S19e, conserved site / Ribosomal protein S19e signature. / Ribosomal protein L19, eukaryotic / Ribosomal protein S21e / Ribosomal protein S21e superfamily / Ribosomal protein S21e / 60S ribosomal protein L18a/ L20, eukaryotes / Ribosomal protein S2, eukaryotic / Ribosomal protein L10e, conserved site / Ribosomal protein L10e signature. / Ribosomal protein L19/L19e conserved site / Ribosomal protein L19e signature. / Ribosomal protein L44e signature. / 40S Ribosomal protein S10 / Ribosomal protein L10e / S27a-like superfamily / Ribosomal protein L34e, conserved site / Ribosomal protein L34e signature. / Plectin/S10, N-terminal / Plectin/S10 domain / Ribosomal protein L5 eukaryotic, C-terminal / Ribosomal L18 C-terminal region / 50S ribosomal protein L18Ae/60S ribosomal protein L20 and L18a / : / Ribosomal L40e family / Ribosomal protein 50S-L18Ae/60S-L20/60S-L18A / Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A / Ribosomal protein S10, eukaryotic/archaeal / Ribosomal protein S30 / Ribosomal protein S30 / Ribosomal protein L44e / Ribosomal protein L44 / Ribosomal protein 60S L18 and 50S L18e / Ribosomal protein L35Ae, conserved site / Ribosomal protein L35Ae signature. / Eukaryotic Ribosomal Protein L27, KOW domain / Ribosomal_L40e / Ribosomal protein L40e / Ribosomal protein L40e superfamily / Ribosomal protein S25 / : / S25 ribosomal protein / Ribosomal protein L27e / Ribosomal protein L27e superfamily / Ribosomal L27e protein family / Ribosomal Protein L6, KOW domain / Ribosomal protein L39e, conserved site / Ribosomal protein L39e signature. / 60S ribosomal protein L35 / Ribosomal protein L30e signature 2. / Ribosomal protein L7A/L8 / Ribosomal protein S27a / Ribosomal protein L30e, conserved site / Ribosomal protein S27a / Ribosomal protein S27a / Ribosomal protein S2, eukaryotic/archaeal / : / Ribosomal protein L6e / Ribosomal protein L34Ae / Ribosomal protein L34e / 60S ribosomal protein L19 / 40S ribosomal protein S29/30S ribosomal protein S14 type Z / Ribosomal protein L13, eukaryotic/archaeal / 60S ribosomal protein L6E / Ribosomal protein S3, eukaryotic/archaeal / Ribosomal protein L7, eukaryotic / Ribosomal protein L30, N-terminal / Ribosomal L30 N-terminal domain / : / Ribosomal protein L30/YlxQ
Similarity search - Domain/homology
Ribosomal protein S14p/S29e / Ribosomal protein S27a family protein / Ribosomal protein L24 family protein / Plectin/S10 domain containing protein / 40S ribosomal protein S12 / 60S ribosomal protein L23 / 40S ribosomal protein S4 / Ribosomal protein L14p/L23e / 40S ribosomal protein S26 / 60S ribosomal protein L35a ...Ribosomal protein S14p/S29e / Ribosomal protein S27a family protein / Ribosomal protein L24 family protein / Plectin/S10 domain containing protein / 40S ribosomal protein S12 / 60S ribosomal protein L23 / 40S ribosomal protein S4 / Ribosomal protein L14p/L23e / 40S ribosomal protein S26 / 60S ribosomal protein L35a / 40S ribosomal protein S27 / 40S ribosomal protein S7 / 60S ribosomal protein L18a / 40S ribosomal protein S21 / 40S ribosomal protein S6 / 60S ribosomal protein L18 / 40S ribosomal protein S19 / Small ribosomal subunit protein uS2 / Ribosomal protein L37 / Ribosomal protein L6e / Ribosomal protein L37a / Ribosomal protein L38e / Ribosomal protein S16 / Ribosomal protein L9 / 60S ribosomal protein L13 / Small ribosomal subunit protein uS5 / Ribosomal protein L14 / 40S ribosomal protein S25 / Ribosomal protein L31 / Ribosomal protein L35 / 40S ribosomal protein S8 / Ribosomal protein L10 / 60S ribosomal protein L7a / Ribosomal protein S8 family protein / Ribosomal protein L21 / Ribosomal protein L2 family protein / Ribosomal protein L13 / 60S ribosomal protein L36 / 40S ribosomal subunit protein S9 / 40S ribosomal protein S3 / Large ribosomal subunit protein eL22 / Receptor for activated C kinase, RACK protein / 60S ribosomal protein L39 / 40S ribosomal protein S24 protein / Small ribosomal subunit protein uS10 / 40S ribosomal subunit protein S14 / Large ribosomal subunit protein uL22 / Ribosomal protein L19 / Small ribosomal subunit protein eS1 / 60S ribosomal protein L32 / Ribosomal protein L1 / Ribosomal protein L24e / Ribosomal protein L15 / Ribosomal protein L7Ae containing protein / 40S ribosomal protein S30 / 60S ribosomal protein L7 / 60S ribosomal protein L11 / 60S ribosomal protein L44 protein / 40S ribosomal protein S18 / Ubiquitin / ribosomal protein CEP52 / Ribosomal protein L34 / Ribosomal L27e protein family protein / Ribosomal L18p/L5e family protein / 60S ribosomal protein L29 / 40S ribosomal protein S28 / Ribosomal protein L15 / Small ribosomal subunit protein uS17 / 40S ribosomal protein S15 / Ribosomal protein RPL4A / Ribosomal protein L3 / 40S ribosomal protein S13
Similarity search - Component
Biological speciesBabesia divergens (eukaryote)
Methodsingle particle reconstruction / cryo EM / Resolution: 2.7 Å
AuthorsGutierrez-Vargas C / Izhaki-Tavor LS / Leger-Abraham M
Funding support United States, 2 items
OrganizationGrant numberCountry
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)5R21AI178196-02 United States
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)T32AI007061 United States
CitationJournal: To Be Published
Title: Ribosomal architecture and rRNA modification landscape in the tick-borne parasite Babesia divergens
Authors: Gutierrez-Vargas C / Izhaki-Tavor LS / Calvopina-Chavez D / Keroack C / Copello P / Duraisingh M / Leger-Abraham M
History
DepositionSep 29, 2025-
Header (metadata) releaseJun 24, 2026-
Map releaseJun 24, 2026-
UpdateJun 24, 2026-
Current statusJun 24, 2026Processing site: RCSB / Status: Released

-
Structure visualization

Supplemental images

emd_72933.png

Downloads & links

-
Map

FileDownload / File: emd_72933.map.gz / Format: CCP4 / Size: 343 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesZ (Sec.)Y (Row.)X (Col.)
0.83 Å/pix.
x 448 pix.
= 369.6 Å		0.83 Å/pix.
x 448 pix.
= 369.6 Å		0.83 Å/pix.
x 448 pix.
= 369.6 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 0.825 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 4.0
Minimum - Maximum-1.6889515 - 40.365430000000003
Average (Standard dev.)0.52166885 (±1.4517474)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions448448448
Spacing448448448
CellA=B=C: 369.6 Å
α=β=γ: 90.0 °

-
Supplemental data

-
Additional map: #1

Fileemd_72933_additional_1.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

-
Sample components

+
Entire : 80S ribosome

EntireName: 80S ribosome
Components
  • Complex: 80S ribosome
    • RNA: 5S ribosomal RNA
    • Protein or peptide: 60S ribosomal protein uL2
    • Protein or peptide: 60S ribosomal protein uL3
    • Protein or peptide: 60S ribosomal protein uL5
    • Protein or peptide: 60S ribosomal protein uL6
    • Protein or peptide: 60S ribosomal protein eL6
    • Protein or peptide: 60S ribosomal protein eL13
    • Protein or peptide: 60S ribosomal protein uL14
    • Protein or peptide: 60S ribosomal protein uL18
    • Protein or peptide: 60S ribosomal protein eL18
    • Protein or peptide: 60S ribosomal protein uL22
    • Protein or peptide: 60S ribosomal protein eL22
    • Protein or peptide: 60S ribosomal protein eL27
    • Protein or peptide: 60S ribosomal protein uL29
    • Protein or peptide: 60S ribosomal protein eL29
    • Protein or peptide: 60S ribosomal protein eL30
    • Protein or peptide: 60S ribosomal protein eL31
    • Protein or peptide: 60S ribosomal protein eL32
    • Protein or peptide: 60S ribosomal protein eL33
    • Protein or peptide: 60S ribosomal protein uL4
    • Protein or peptide: 60S ribosomal protein uL13
    • Protein or peptide: 60S ribosomal protein eL14
    • Protein or peptide: 60S ribosomal protein uL15
    • Protein or peptide: 60S ribosomal protein eL15
    • Protein or peptide: 60S ribosomal protein uL16
    • Protein or peptide: 60S ribosomal protein eL19
    • Protein or peptide: 60S ribosomal protein eL20
    • Protein or peptide: 60S ribosomal protein eL21
    • Protein or peptide: 60S ribosomal protein uL24
    • Protein or peptide: 60S ribosomal protein uL30
    • Protein or peptide: 60S ribosomal protein eL34
    • Protein or peptide: 60S ribosomal protein eL36
    • Protein or peptide: 60S ribosomal protein eL37
    • Protein or peptide: 60S ribosomal protein eL38
    • Protein or peptide: 60S ribosomal protein eL39
    • Protein or peptide: 60S ribosomal protein eL40
    • Protein or peptide: 60S ribosomal protein eL43
    • Protein or peptide: 60S ribosomal protein eL42
    • Protein or peptide: 60S ribosomal protein eL8
    • Protein or peptide: 40S ribosomal protein eS1
    • Protein or peptide: 40S ribosomal protein uS2
    • Protein or peptide: 40S ribosomal protein uS4
    • Protein or peptide: 40S ribosomal protein eS4
    • Protein or peptide: 40S ribosomal protein uS5
    • Protein or peptide: 40S ribosomal protein eS6
    • Protein or peptide: 40S ribosomal protein eS7
    • Protein or peptide: 40S ribosomal protein uS8
    • Protein or peptide: 40S ribosomal protein eS8
    • Protein or peptide: 40S ribosomal protein uS12
    • Protein or peptide: 40S ribosomal protein uS15
    • Protein or peptide: 40S ribosomal protein uS17
    • Protein or peptide: 40S ribosomal protein eS21
    • Protein or peptide: 40S ribosomal protein eS26
    • Protein or peptide: 40S ribosomal protein eS27
    • Protein or peptide: 40S ribosomal protein eS30
    • Protein or peptide: 40S ribosomal protein uS3
    • Protein or peptide: 40S ribosomal protein uS7
    • Protein or peptide: 40S ribosomal protein uS9
    • Protein or peptide: 40S ribosomal protein uS10
    • Protein or peptide: 40S ribosomal protein eS12
    • Protein or peptide: 40S ribosomal protein uS13
    • Protein or peptide: 40S ribosomal protein uS14
    • Protein or peptide: 40S ribosomal protein uS19
    • Protein or peptide: 40S ribosomal protein eS19
    • Protein or peptide: 40S ribosomal protein eS28
    • Protein or peptide: Receptor for activated C kinase 1, RACK1 protein
    • Protein or peptide: 40S ribosomal protein eS10
    • Protein or peptide: 40S ribosomal protein eS24
    • Protein or peptide: 40S ribosomal protein eS25
    • Protein or peptide: 40S ribosomal protein eS31
    • Protein or peptide: 60S ribosomal protein eL41
    • Protein or peptide: 40S ribosomal protein eS17
    • Protein or peptide: 40S ribosomal protein uS11
    • RNA: 5.8S ribosomal RNA
    • RNA: 28S ribosomal RNA
    • RNA: E-site tRNA
    • RNA: 18S ribosomal RNA
    • Protein or peptide: 60S ribosomal protein uL1
    • Protein or peptide: 60S ribosomal protein uL23
    • Protein or peptide: 60S ribosomal protein eL24
  • Ligand: MAGNESIUM ION
  • Ligand: ZINC ION
  • Ligand: POTASSIUM ION
  • Ligand: water

+
Supramolecule #1: 80S ribosome

SupramoleculeName: 80S ribosome / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#63, #80, #64-#79
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987

+
Macromolecule #1: 5S ribosomal RNA

MacromoleculeName: 5S ribosomal RNA / type: rna / ID: 1 / Number of copies: 1
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 39.408461 KDa
SequenceString:
GUUGCCGGCC AUACUGCGUC GAAAAUACCG GAUCCCAUCU GAACUCCGAA GUCAAGCGGC GCUAGGCCGG GAUAGUACUG GGGUGGGGG ACCGCCCGGG AACACCUUUC GGUGCCGGCA ACC

+
Macromolecule #73: 5.8S ribosomal RNA

MacromoleculeName: 5.8S ribosomal RNA / type: rna / ID: 73 / Number of copies: 1
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 50.963242 KDa
SequenceString:
AAACUUUCAG CGAUGGAUGU CUUGGCUCAC ACAACGAUGA AG(OMG)ACGCAGC AAAUUGCGAU AAGCAUUAUG ACUUGC AGA CUUCUGCGAU UUAACAGACC UCUGAACGUA ACAAGCACAC CGCCUCUGCU CGCAUGCGGU ACUCCCGUUU CAGUGAG CC C

GENBANK: GENBANK: EF458186.1

+
Macromolecule #74: 28S ribosomal RNA

MacromoleculeName: 28S ribosomal RNA / type: rna / ID: 74 / Number of copies: 1
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 1.073104375 MDa
SequenceString: AUCGCUCCUG AAAUCGGGUG AGGCUAUCCG CUGAAUUUAA GCAUAUAAUU AAGCGGCAGA AAAGAAAAUA ACUAUGAUUC CCCUAGUAA CGGCGAGUGA AGCGGGAAUA GUCCAAAGUG UAAAUCGUUU CUCUGUGAGA UUCGACUUGU GGCCUUGAGC G GUUUAGCC ...String:
AUCGCUCCUG AAAUCGGGUG AGGCUAUCCG CUGAAUUUAA GCAUAUAAUU AAGCGGCAGA AAAGAAAAUA ACUAUGAUUC CCCUAGUAA CGGCGAGUGA AGCGGGAAUA GUCCAAAGUG UAAAUCGUUU CUCUGUGAGA UUCGACUUGU GGCCUUGAGC G GUUUAGCC AGUGGCGCAU GUCAGUAAAG UUUCUUGGAA CAGGACGCCA AUGAGGGUGA UAGCCCCGUU AUCACUGACA AU UGCGACC ACGUGUCGGU UGACCUGCAU AGAGUCGUGC UUUUUGGGAU UGAAGCGCAA AUUGUGAGGU AGGCUUCUCA UAA GACUAA AUACUGGUGU GAGACCGAUA GUAUACAAGU ACCGUGAGGG AAAGAUGAAA AGAACUCUGG AAAGAGUGUU AAAA GUACC UGAAAUUGCU GAAAGGGAAG CAAUUGGAAC GAACGCCCGC GUCUGCCGCC GCUCUGGUUC UCCUUUGUGU GCGCU UUCG CUCGGCCAGC GUCGCUUGUG CGGCUCUGAC GUGAUUGGUU UGCAGUUGAC CUACCCGGUU CUUCUGCUUC CUGUUC CCG UUUGCCGCAC GAGUGUCUGG GUGCGCUUUG CGUGCCCCUU GCGCUAGUAG CUUGAUCGCU GUCCGCCGUA CAAGUUC CA ACUGACCCGU CUUG(1MA)(A2M)AC(A2M)C GGACCAAGGA GUCUAUCACC CGUGCGAGUG CCUGGGUGUC AAACCC UCG CGCGUAAUGA AAGUAAGAGC AUGUUGGCCU UGCGUUAGCG UGGCCUCUCC UGCGGCCGGC GACCUUUUGG UUCGUCG CG CUUGAGCACG GUUGCUAGGA CCC(OMG)AAAGAU GGUGA(A2M)CUAU GCCUGGGUAG GAUGAAGUCA GGCGAAAGCC UGAUGGAGG UCCGCAGCGA UACUGACGUG CAAAUCGUUC GUCGAAUCUG GGUAUAG(OMG)GG CGAAAGACUA AUCGAAC CA UCUAGU(A2M)GCU GGUUUCUUCC GAAGUUUCCC UCAGGAUAGC UGGAAUCCGU GGGGCAGUAG CCUAACUUCA GUUU UACCA GGUAAAGCUA AUGAUUAGAG GUAUCGGGGG GCCGUGCCCC UUGACCUAUU CUCAAACUUU AAAUGGGUAA GAUCC GCAU GCUUGCUUAA GUUGAAGCUU GCGGCUGAAU GUGGAUUCCA AGUGGGCCAU UUUUGGUAAG C(A2M)GAACUGGC GA UGAGGGA UGCACCUAAC GCUGGGUUAA GGUGCCUAAA UACCUGCUCA UCAGAUACCA UAAAAGGUGU UGGUUCAUUU AGA CAGCAG GACGGUGGUC AUGGAAGUCG AAAUCCGCUA AGGAGUGUGU AACAACUCAC CUGCCGAAUG AACUUGCCCU GAAA AUGGA UGGCGCUCAA GCAGGUUACC GAAACCCGGC CAUUGGUUCA UUUUUCAGUU CCAAUGUGUA GGAAGACGUG GGCAU GGCG UCGAAGCCUC GUGCGUAAGC CGUGGUGGAG CCUUGCCUAG UGCGGAUCUU GGUGGUAGU(A2M) GCAACUAUUC AA AUGAGAU CUUUGAAGAC UGAUGUGGAG CAGGGUUCCA UGUGAACAUU GAUUGGCCAU GGGUUAGCCG GUCCUAAGCA CCA GCCUUG CCGCGAUGAG AAUUGGGCUU UGCCCAUACG UGCGAAAGGG GAUAGGGUCA ACAUUCCCUA GCCGGGUCGU GGAU AUUGG GUGGCAACAC AAGUGAACUU CUCACCGCAU GCGCCAGCCC CGGGUAGCGU UUUCUUUGCU ACUUAACACU GAAAA GUUC CGUGGAAUCA CUUUGCGUGG CGAUACGGUA CUUGCUGUGG CAUAGCAUCU CGGCCUUCGA GGUGUCCGGU GCGCUG GCG ACUGCCCUUG AAGCGGGAAG GGAACGUUUU AUUCGCACCC CCGUCCGUAC CGACAACCGC AUCA(OMG)GUCUC CUA GGUUAG CAGCCUCUGG UCGAUAGAAU AAGGUAGAUA AGGGAAGUCG GCAAAAUGGA UCCGUAACUU CGGGAUAAGG AUUG GCUCU GAGGGCCGGG CGGGUCUGCG AACUAGAGCG GAAGCCGUCG CCCAUCGACG CCUGGCACGG UUCACGCCGA GUCGG UCGA CGAAGGGUGU GGCUAACGAC UCUGGACUCG CUUCCGCGAU GAACGGCCAG CUCAGAACUG GAGCGGACAA GGGGAA UCC GACUGUUUAA UUAAAACCAA GCAUUGCGAU GGCCCCCACG GGUGUUGACG CAAUGUGAUU UCUGCCCAGU GCUCUGA AU GUCAACG(PSU)GG UGAAAUUCAA CCAAGCGCGG GUAAACGGCG GGAGUAACUA UGAC(PSU)C(PSU)CUU AAGGUA GCC AA(A2M)UGCCUC(OMG) UCAUCUAAUU AGUGACGCGC AUGAAUGGAU UAACGAG(A2M)UU CCCACUGUCC CUAUC UGCC AUCUAGCGAA CCCACAGCCA AGGGAACGGG CUUGGCAAAA UCAGCGGGGA AAGAAGACCC UGUUGAGCU(OMU) CA C(UY1)CUAGU CCGGCUUUGU GAGACGACUU GAGGGGUGUA GAAUAGGUGG GAGGCUCGCC GACCGUGAAA UACCACUAC CCUUGAUGUU GUCUUGCUUA UUCCGUAAUG UAAGGAUGCA GUAGCAUUUA CAGAAUCAAG GUUCGCCAAC UUUGGCGGAA GACAUAGCC AGG(PSU)GGGGAG UUUGACUG(OMG)G GCGGUACAUC UGUUAAAAGA UAACGCAGGU GUCCCAAGGC GAA CUCAGU GAGGACAGAA AUCUCACGUU GACCAAAAGG GGAAAAGUUC GCUUGAUUUU GAUUUUCAG(OMU) AAAAA(OMU) ACA AACUGUGU(A2M)A GCAUGGCCUA UCGAUCCUUU GAGUCCGCGA GACUUGCGGC UAGAGGUGUC AGAAAAGUUA CCA CAG(OMG)GA UAACUGGC(PSU)U GUGGCAGCCA AGCGUUCAUA GCGACG(PSU)UGC UUUUUGA(PSU)CC UU(5MC)G AUGUC GG(OMC)(PSU)CUUCCU AUCAUUGAGA UGCAGAAGUC UCAAAGUGUC (OMG)GA(PSU)(UY1)(OMG)(PSU) (PSU)C ACCCGCUAAU AGGGAACG(PSU)G (A2M)GCUGGGUU(PSU) AGA(OMC)CGUCGU GAGACAGGU(PSU) AGUU UUACC CUACUGAUGA CCGCGUCGCU AAAGUAAUUC CACCUAGUAC GAGAGGAACA GUGGAUUCGG AUACUUGGUU AAUGC GCUU GGCUGAGAAG CCAGUGGCGC GAAGCUACCA UCCGUUGGAU AAUGACUGAA CGCCUCUAAG UCAGAAUCCA UACUUG ACC GACGCUAUUC ACCGCUCUAG CGUAUUCGCA ACGCAAUAUG CUCUACCAGU AGCCUAAGCC UGCAUCGGCU AAUUCCG AA GCACAAUUCC AAUCGCUAGA GCGAUACACC CAUUGUAGAC GACUUUGACG CACCCGGGUA UUGUAAGCGC GAGAGUGG G CUUGACUUAC GAUCCGCUGA GAUUCAGCCC GGAGUGUUGU UGUGUGUAU

+
Macromolecule #75: E-site tRNA

MacromoleculeName: E-site tRNA / type: rna / ID: 75
Details: The E-site tRNA (PDB 3J7A) was docked into the ribosome using ChimeraX and further refined in PHENIX.
Number of copies: 1
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 23.774059 KDa
SequenceString:
GGGUAAUUGG CGCAGUUGGU UAGCGCGCGG GUCUCAUAAU CCCGAGGUCG UGAGUUCGAU CCUCACAUUA CCCA

+
Macromolecule #76: 18S ribosomal RNA

MacromoleculeName: 18S ribosomal RNA / type: rna / ID: 76 / Number of copies: 1
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 556.419688 KDa
SequenceString: AACCUGGUUG AUCCUGCCAG UAGUCAU(A2M)UG CUUGUCUUAA AGAUUAAGCC AUGCAUGUCU AAGUACAAAC UUUUUA CGG UGA(A2M)ACUGCG AAUGGCUCAU UACAACAGUU AUAGUUUCUU UGGUAUUCGU UUUCCAUGGA UAACCGUGCU AAU UGUAGG ...String:
AACCUGGUUG AUCCUGCCAG UAGUCAU(A2M)UG CUUGUCUUAA AGAUUAAGCC AUGCAUGUCU AAGUACAAAC UUUUUA CGG UGA(A2M)ACUGCG AAUGGCUCAU UACAACAGUU AUAGUUUCUU UGGUAUUCGU UUUCCAUGGA UAACCGUGCU AAU UGUAGG GCUAAUACAA GUUCGAGGCC UUUUGGCGGC GUUUAUUAGU UCUAAAACCA UCCCUUUUGG UUUUCGGUGA UUCA UAAUA AACUUGCGAA UCGCAAUUUU UUGCGAUGGA CCAUUCAAGU UUCUGACCCA UCAGCUUGAC GGUAGGGUAU UGGCC UACC GAGGCAGCAA CGGGUAACGG GGAAUUAGGG UUCGAUUCCG GAGAGGGAGC CUGAGAAACG GCUACCACAU CCAAGG AAG GCAGCAGGCG CGCAAAUUAC CCAAUCCUGA CACAGGGAGG UAGUGACAAG AAAUAACAAU ACAGGGCAAU UGUCUUG UA AUUGGAAUGA UGGUGACCUA AACCCUCACC AGAGUAACAA UUGGAGGGCA AGUCUGGUGC CAGCAGCCGC GG(OMU)A AUUCC AGCUCCAAUA GCGUAUAUUA AACUUGUUGC AGUUAAAAAG CUCGUAGUUG AAUUUUUGCG UGGUGUUAAU AUUGA CUAA UGUCGAGAUU GCACUUCGCU UUUGGGAUUU AUCCCUUUUU ACUUUGAGAA AAU(PSU)AGAGUG UUUCAAGCAG AC UUUUGUC UUGAAUACUU CAGCAUGGAA UAAUAGAGUA GGACUUUGGU UCUAUUUUGU UGGUUUGUGA ACCUUAGUAA UGG UUAAUA GGAACGGUUG GGGGCAUUCG UAUUUAACUG UCAGAGGUGA AAUUCUUAGA UUUGUUAAAG ACGAACUACU GCGA AAGCA UUUGCCAAGG ACGUUUUCAU UAAUCAAGA(A2M) CGAAAGUUAG GGGAUCGAAG ACGAUCAGAU ACCGUCGUAG U CCUAACCA UAAACUAUGC CGACUAGGGA UUGGAGGUCG UCAUUUUUCC GACUCCUUCA GCACCUUGAG AGAAAUCAAA GU CUUUGGG UUCUGGGGGG AGUAUGGUCG CAAGGCUGAA ACUUAAAGGA AUUGACGGAA GGGCACCACC AGGCGUGGAG CCU GCGGC(PSU) UAAUU(PSU)GAC(B8N) CAACACGGGG AAACUCACCA GGUCCAGACA AUGUUAGGA(OMU) UGACAGAU U GAUAGCUCUU UCUUGAUUCU UUGGGUGGUG (OMG)UGCAUGGCC GUUCUUAGU(PSU) GGUGGAGUGA UUUGUCUGGU U AAUUCCGU UAACGAACGA GACCUUAACC UGCUAACUAG UGUCCGUAAA AAGGUUCGUC CGUUACGGUU UGCU(OMU)CUU A GAGGGACU(PSU)U GCGGCUCUAA GCCGCAAGGA AGUUUAAGGC AAUAACA(OMG)GU CUGUGAUGCC CUUAGAUGUC C UGGGCUGC ACGCGCGCUA CACUGAUGCA UUCAUCGAGU UUUAUCCCUU CCCGAAAGGG CUGGGUAAUC UUUAGUAUGC AU CGUGACG GGGAUUGAUU UUUGCAAUUC UAAAUCAUGA ACGAG(7MG)AAUG CCUAGUAUGC GCAAGUCAUC AGCUUGUGC AGAUUACGUC CCUGCCCUU(PSU) GUACACACCG (OMC)CCGUCGCUC CUACCGAUCG AGUGAUCCGG UGAAUUAUUC GG ACCGUGG CCUUUCCGAU UCGUCGGCUU GGCCUAGGGA AGUCUUGUGA ACCUUAUCAC UUAAAGGA(A2M)G GAGAAGUCG UAACAAGGUU UC(4AC)GUAGGUG (MA6)(MA6)CCUGCGGA AGGAUCAU(PSU)C

+
Macromolecule #2: 60S ribosomal protein uL2

MacromoleculeName: 60S ribosomal protein uL2 / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 27.998443 KDa
SequenceString: MGRIIRGQRK GRGSVFKAHV HSRKGAAKLR RFDYAENHGY IRGVVKEILH DPGRGAPLAS INFRNAYKFG IDKERVVAVE GMYTGQYVY FGREAKLSIG NCLPVGQMPE GTVISSLEEK RGDRGRLAKA SGTYATIIGH SDDGKTTRVR LPSGARKTIE S ASRAIVGI ...String:
MGRIIRGQRK GRGSVFKAHV HSRKGAAKLR RFDYAENHGY IRGVVKEILH DPGRGAPLAS INFRNAYKFG IDKERVVAVE GMYTGQYVY FGREAKLSIG NCLPVGQMPE GTVISSLEEK RGDRGRLAKA SGTYATIIGH SDDGKTTRVR LPSGARKTIE S ASRAIVGI VAGGGRIDKP LLKAGTAYHK YKAKRNCWPR VRGVTMNPVD HPHGGGNHQH IGKPSTVPRG APPGQKVGLI AA RRTGLLR GKKKKFKSES

UniProtKB: Ribosomal protein L2 family protein

+
Macromolecule #3: 60S ribosomal protein uL3

MacromoleculeName: 60S ribosomal protein uL3 / type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 44.597031 KDa
SequenceString: MSHRKFEKPR SGNLGFLPRK RCRTIRGKIR SFPKDDPSKP PHFTAFMGYK AGMTHVTYEP DKPGSKLHKK DTVEAVTIVE TPPMVVVGV VGYIETPRGL RVLSTVWAGH LSNECRRRFY KNWYKSKKKA FTKYAKKFAE SKMSKNISRI VNYCTVVRAI C HTQPSKTP ...String:
MSHRKFEKPR SGNLGFLPRK RCRTIRGKIR SFPKDDPSKP PHFTAFMGYK AGMTHVTYEP DKPGSKLHKK DTVEAVTIVE TPPMVVVGV VGYIETPRGL RVLSTVWAGH LSNECRRRFY KNWYKSKKKA FTKYAKKFAE SKMSKNISRI VNYCTVVRAI C HTQPSKTP LSVKKAQIIE IQINGGTIQE KVDYVTKMFE QPLPVSAVFG SNETIDVLGV TKGHGMKGVI SRFGVTRLPR KT HRGLRKV ACIGSWHPAR VQFQVPRSGQ KGYFHRTERN KKIYRIGSGS NPRNASTDAD ITEKQITPMG GFPHYGPVKE DFL MLKGCI VGCKKRPIVL RKTLVPQVSR EALAEVNLRF IDTSSKWGHG RFQTSTEKQK FYGPLKKTLT NTVAASVSS

UniProtKB: Ribosomal protein L3

+
Macromolecule #4: 60S ribosomal protein uL5

MacromoleculeName: 60S ribosomal protein uL5 / type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 19.797 KDa
SequenceString:
MTEENVMRNI RISKLVLNIG VGESGDRLTR AGKVLEQLTE QKPVFSKCRF TIRSLGVRRN EKIACHVTVR GQKALELLER GLKVKEYEL KKENFSNTGN FGFGIQEHID LGLKYDPSTG IYGMDFYVQL VRPGYRVTKR RKCRSKIGSN HKITKEDAMK W FQEKFDGI IFN

UniProtKB: 60S ribosomal protein L11

+
Macromolecule #5: 60S ribosomal protein uL6

MacromoleculeName: 60S ribosomal protein uL6 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 21.426139 KDa
SequenceString:
MKTTLSTDTL KIPDGVTVTV NSRKVTVSGK YGELTRDFSH VPIEIRLSKN KKTVVVMQWF GTRAMIATIR TVMTHINNMI IGVTKKYQY KMRLVHAHFP INSNITDDGK VIEIRNFLGE KRVRIIKVLP GVKIEKSEAV KDEIILTGVD VESVGRSAAL I HQCALVRN KDIRQFLDGI YVSEKGLVEQ EA

UniProtKB: Ribosomal protein L9

+
Macromolecule #6: 60S ribosomal protein eL6

MacromoleculeName: 60S ribosomal protein eL6 / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 23.7081 KDa
SequenceString: MSHAGKTLRP KVLLNRRKKI LTAAGRFKTV GRKVGGTPTV RSSLKPGTVL ILLSGSYKGK RVVLLKVLKE SGLLVVTGPF LFNGVPLRR VNPRYVIATS TNIFEMPEVS GPECRAAVEA AVAGLSDASF GKTKETRLAE FKDRKKRNKK DAMFVDNAEA E KTSEETKK ...String:
MSHAGKTLRP KVLLNRRKKI LTAAGRFKTV GRKVGGTPTV RSSLKPGTVL ILLSGSYKGK RVVLLKVLKE SGLLVVTGPF LFNGVPLRR VNPRYVIATS TNIFEMPEVS GPECRAAVEA AVAGLSDASF GKTKETRLAE FKDRKKRNKK DAMFVDNAEA E KTSEETKK MIKEKQDKID GALTPFLKKY ELLCQYLKTR FTLRSGMYPH KLKF

UniProtKB: Ribosomal protein L6e

+
Macromolecule #7: 60S ribosomal protein eL13

MacromoleculeName: 60S ribosomal protein eL13 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 22.948297 KDa
SequenceString: MKHNNVIHNA HRVKCSGKYI KAELDQAGRK KARLIARRKR VAKAGVTPLG YCRPLVHMPS RRYNYKVRMG RGFTLQELKA AGIGKKVAM SIGIAVDHRR CNRNAESLNL NVQRLKTYLS KLVMIPRKKA VKKGFSGIPD DTPRDKLASM VLKQQKIKDV M PVVQPFTF ...String:
MKHNNVIHNA HRVKCSGKYI KAELDQAGRK KARLIARRKR VAKAGVTPLG YCRPLVHMPS RRYNYKVRMG RGFTLQELKA AGIGKKVAM SIGIAVDHRR CNRNAESLNL NVQRLKTYLS KLVMIPRKKA VKKGFSGIPD DTPRDKLASM VLKQQKIKDV M PVVQPFTF EAPRAVASKD TEGSCYQKLR LARKAAKAKK TTDEE

UniProtKB: 60S ribosomal protein L13

+
Macromolecule #8: 60S ribosomal protein uL14

MacromoleculeName: 60S ribosomal protein uL14 / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 14.816514 KDa
SequenceString:
MKRGRGGAGG NKLRVTLGLP VGAIINCCDN SGGKNLYIIA VKGIGACLNR YPAAAVGDMV LATVKKGKPD LRKKVHLAVI VRQRKAWRR RDGYFIYFED NAGVIVNNKG EMKGSAITGP VAKECAELWP KISAAAPSIV

UniProtKB: Ribosomal protein L14p/L23e

+
Macromolecule #9: 60S ribosomal protein uL18

MacromoleculeName: 60S ribosomal protein uL18 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 35.365902 KDa
SequenceString: MAFIRVLKNK AYFKRYQVKY RRRREGKTDY YCRRRMVLQD KNKYASPKYR FVVRFTNKRI ICQIISATIV GDKVHASADS TELKHFGIK VGLTNYAAAY CTGLLLARRL LTKLNLDKQF VGKDEPDGTS FHIEEEDNER RPFKALLDVG IKIVTTGNKV F GALKGACD ...String:
MAFIRVLKNK AYFKRYQVKY RRRREGKTDY YCRRRMVLQD KNKYASPKYR FVVRFTNKRI ICQIISATIV GDKVHASADS TELKHFGIK VGLTNYAAAY CTGLLLARRL LTKLNLDKQF VGKDEPDGTS FHIEEEDNER RPFKALLDVG IKIVTTGNKV F GALKGACD GGLHIPHSEK RFPGYSVDEE KNANYDAEMH RERIFGIHVA NYMSEMKEED PEKYQKHFSA FLKAGVTEDN IE EMYAKAH AAIRANPIIE KQKKAAPTRT VKGHTIITSD GKSYVRNKKI TKEQRRERVK QKMLMCADA

UniProtKB: Ribosomal L18p/L5e family protein

+
Macromolecule #10: 60S ribosomal protein eL18

MacromoleculeName: 60S ribosomal protein eL18 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 24.357873 KDa
SequenceString: MLQYSSRYTA KICVGATVAI TFALGSLAKP PSGVAQGIDL QKGGRVRKPG RKALVSKDPY LRLLVKTYKT LSRRTNSAFN RTVLKRLIM PRRFKVPISL SKLIKHMKGR EDTTAVIVGT VTDDLRVSEV PKLSVCALHV SDSAKARLLK AGGEVLTFDE L VTRAPKGS ...String:
MLQYSSRYTA KICVGATVAI TFALGSLAKP PSGVAQGIDL QKGGRVRKPG RKALVSKDPY LRLLVKTYKT LSRRTNSAFN RTVLKRLIM PRRFKVPISL SKLIKHMKGR EDTTAVIVGT VTDDLRVSEV PKLSVCALHV SDSAKARLLK AGGEVLTFDE L VTRAPKGS KCTLLRGATK AREAEKHFGK APGTPGSHTK PYVRSKGRKF EKARGRRKSC GFKV

UniProtKB: 60S ribosomal protein L18

+
Macromolecule #11: 60S ribosomal protein uL22

MacromoleculeName: 60S ribosomal protein uL22 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 22.143061 KDa
SequenceString: MVKYSREPSN ISKCAKAKGS HLRVHFKNTY ETAEAIRGLS VLRAKKYLEQ VIDHKRCVPF RKFNGGVGRC AQAKEFKHTQ GRWPEKSCR ILLDLLVNLQ SNAEVKGLDV DRLFIEHIQV NRAPLGRRRS YRAHGRIIPF LSHPCHVEII AVEKDENVPK F VAPAKKVI ...String:
MVKYSREPSN ISKCAKAKGS HLRVHFKNTY ETAEAIRGLS VLRAKKYLEQ VIDHKRCVPF RKFNGGVGRC AQAKEFKHTQ GRWPEKSCR ILLDLLVNLQ SNAEVKGLDV DRLFIEHIQV NRAPLGRRRS YRAHGRIIPF LSHPCHVEII AVEKDENVPK F VAPAKKVI KLNKRQLARL RLKDARAAAR AATKAA

UniProtKB: Large ribosomal subunit protein uL22

+
Macromolecule #12: 60S ribosomal protein eL22

MacromoleculeName: 60S ribosomal protein eL22 / type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 14.211587 KDa
SequenceString:
MKELKKKSQI KKIIPGHKSK FLLDCTAPAN DNIINPSGLE KYLQDRIKVD GKTGNLGSSV TVTREKNKIH ITAEIPFSKR YIKYLTKKY LKKQQLRDFL RVVATKEHSY ELRYFQINDE AQA

UniProtKB: Large ribosomal subunit protein eL22

+
Macromolecule #13: 60S ribosomal protein eL27

MacromoleculeName: 60S ribosomal protein eL27 / type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 16.799973 KDa
SequenceString:
MAKLMKPGRV VIVLAGRRAG RKGIIVHCNE SASKRRPYAN CLVAGIDKHP LKVTKKMSKE KIQKRLRIKT FVKYINVNHL MPTRYTVSS RIDPKTLVTD EQMENQATRK EARKALKAIL EETFNNPESG EGKSLKDTQF LRKKLRF

UniProtKB: Ribosomal L27e protein family protein

+
Macromolecule #14: 60S ribosomal protein uL29

MacromoleculeName: 60S ribosomal protein uL29 / type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 14.473485 KDa
SequenceString:
MGKIKVHELR NKTDAELLKQ LEELKQEYAV MRVQKVTVTS TSKLSQIGII RKGIAKVLTV YNQRRKEEAR KSYKKLSKMP LNLRPKLTR AKRRALTAKQ LHLKTLKQRK RCENIPKRKY ALLA

UniProtKB: Ribosomal protein L35

+
Macromolecule #15: 60S ribosomal protein eL29

MacromoleculeName: 60S ribosomal protein eL29 / type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 6.820037 KDa
SequenceString:
MAKSKNHTNH NQIKKAHRNG IKKVKIPKKI STKGMCPKFL RNQKFCKRHQ NGGRGDSDE

UniProtKB: 60S ribosomal protein L29

+
Macromolecule #16: 60S ribosomal protein eL30

MacromoleculeName: 60S ribosomal protein eL30 / type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 11.965079 KDa
SequenceString:
MVKKTKSKLS DNMNSKLQLV MKSGKVCLGF KSTKTALRNG KALLVIISNN CPPIRRSELE HYAMLAKCNV HFFPGDNNDL GTVCGKYFR VGCMAVLDAG DSDIIRSYE

UniProtKB: Ribosomal protein L7Ae containing protein

+
Macromolecule #17: 60S ribosomal protein eL31

MacromoleculeName: 60S ribosomal protein eL31 / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 13.711126 KDa
SequenceString:
MAKDKGKKKA LQPITRDYTI HLHKLCHRVT FKRKAPTAIK KIKEFASKAM KTKDVRIDNT LNRFIWANGI RNLPRRVRIR VSRKRNDDD AKEPMFTLVQ HVPVEDFTGL QTEVVANE

UniProtKB: Ribosomal protein L31

+
Macromolecule #18: 60S ribosomal protein eL32

MacromoleculeName: 60S ribosomal protein eL32 / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 15.497345 KDa
SequenceString:
MAIRKFGGLV HKRTKKFRRF QSDRFKRVKE NWRKPKGIDC RVRRRFKGTV LTPKIGYGTD KKTRNRLPSG YYKVVVNTPD EIDVLLMHQ KTHVAEIGHS VSARKRRVIL DRAKKLGIKV TNSGARVKVE ERE

UniProtKB: 60S ribosomal protein L32

+
Macromolecule #19: 60S ribosomal protein eL33

MacromoleculeName: 60S ribosomal protein eL33 / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 13.34685 KDa
SequenceString:
MAKCRKPWKK EPCRLYTKAI FMGYKRSKVN QDQKSSLLKL EGVNSREETA FYMGKKVAYV YKSKNIKNGT RFRAIWGKIR RPHGNGGTV RASFRKNLPP CAMGSKVRVF LYPSHI

UniProtKB: 60S ribosomal protein L35a

+
Macromolecule #20: 60S ribosomal protein uL4

MacromoleculeName: 60S ribosomal protein uL4 / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 39.509617 KDa
SequenceString: MTLRPEVSIF KVADGRRAGA TVMPKVFSSP LRLDLVRSVH TNMSKNKRQA YAISKMSGYQ TSARSWGTGR AMARVPRVKG GGTHRAGQA AYANFCRAGG MYAPTRVWRR WHRKVNLKEK RKALAAAVAA TAVVPLVMAR GHRIEGIGEV PMVVDDSIEQ I NKTKDAIK ...String:
MTLRPEVSIF KVADGRRAGA TVMPKVFSSP LRLDLVRSVH TNMSKNKRQA YAISKMSGYQ TSARSWGTGR AMARVPRVKG GGTHRAGQA AYANFCRAGG MYAPTRVWRR WHRKVNLKEK RKALAAAVAA TAVVPLVMAR GHRIEGIGEV PMVVDDSIEQ I NKTKDAIK LLETLGLGAE LERVDKVRGH GRDGRKKRPV GPLIILRASA VEGRRAFRNI AGVEVACVER LNLLKLAPAG TL GRLCIWS KSAFEAVDEY LKVTPSKLLA NADLSAIVNS APVQSVLLAP KKSGPRVTIK RGCSKKILKF VQYKLRKEGL AGV KKNAKK TKEEIRKCRA NSKAFIKNIR EAISTKPLSV AEEV

UniProtKB: Ribosomal protein RPL4A

+
Macromolecule #21: 60S ribosomal protein uL13

MacromoleculeName: 60S ribosomal protein uL13 / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 23.326871 KDa
SequenceString: MFKEKIVIDC KGHLMGRLAS IVAKELLSGQ DIVCVRCEDI NISGSLYRNK LKYHRFLRLR TNSNPRHGPF HLRKPSKMFW RVVRGMIPH KTKRGALALK RLKSYEGVPA PYDKVKKQVV PSALRFMKLK PHRRYCRLGD VLAKVGWNYD GLVQKLEARR K ARSQEYYK ...String:
MFKEKIVIDC KGHLMGRLAS IVAKELLSGQ DIVCVRCEDI NISGSLYRNK LKYHRFLRLR TNSNPRHGPF HLRKPSKMFW RVVRGMIPH KTKRGALALK RLKSYEGVPA PYDKVKKQVV PSALRFMKLK PHRRYCRLGD VLAKVGWNYD GLVQKLEARR K ARSQEYYK AKVEQRKSAA KAKAEALAKL PAEHKNMLTH VGLA

UniProtKB: Ribosomal protein L13

+
Macromolecule #22: 60S ribosomal protein eL14

MacromoleculeName: 60S ribosomal protein eL14 / type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 14.909698 KDa
SequenceString:
MPLFTKFVEP GRLCLITYGP DAGKLCFIVD IVTSTRILVD GAKVTGVERQ QLPLTWIKLT DTKVNLNRGA KTGALAKAIK KYDALNAFK QTTLGKKLEY AERRKNLTDF ERFKLLVAHK ERRKLMKKAA AGSA

UniProtKB: Ribosomal protein L14

+
Macromolecule #23: 60S ribosomal protein uL15

MacromoleculeName: 60S ribosomal protein uL15 / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 16.598564 KDa
SequenceString:
MTTRFKNCRK LRGHVSHGHG RVGKHRKHPG GRGKAGGSSH HRILFDKFHP GYFGKVGMRY FHKVKNRFHC KTVNVEHLWS MVPREEVEA TANDTSKAPV LDVVQKGYFK VLGTGKMPQR PLIVKARFFS KLAEKKIKEA GGACVLVA

UniProtKB: Ribosomal protein L15

+
Macromolecule #24: 60S ribosomal protein eL15

MacromoleculeName: 60S ribosomal protein eL15 / type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 24.502082 KDa
SequenceString: MGAYRYMEEL WRKKQCDAMR TLLRIRTWEY RQLSAVHRVS KPTRPDKARR LGYKAKQGFV IYRVRIKRGD RKKKVQNGIV YGKPKHQGI RKQKSKRNLR SLAEERVGRR CGGLRVLNSY WVGQDAVYKF YEVIMVDPFH NAIRNDPRMQ YICKPVHKHR E MRGLTSAG ...String:
MGAYRYMEEL WRKKQCDAMR TLLRIRTWEY RQLSAVHRVS KPTRPDKARR LGYKAKQGFV IYRVRIKRGD RKKKVQNGIV YGKPKHQGI RKQKSKRNLR SLAEERVGRR CGGLRVLNSY WVGQDAVYKF YEVIMVDPFH NAIRNDPRMQ YICKPVHKHR E MRGLTSAG RKGRGLRVKG PKAAKLRPSI HANWKRRQIQ RLWRMR

UniProtKB: Ribosomal protein L15

+
Macromolecule #25: 60S ribosomal protein uL16

MacromoleculeName: 60S ribosomal protein uL16 / type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 25.790279 KDa
SequenceString: MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIYDMGLKG ADVDDFPYAV HIVSGEYEQI SSEALEAARI CANKFMVKAG GKESFHIRV RVHPFHVLRI NKMLSCAGAD RLQTGMRRAF GKPNGVVARV NIGQILMSVR TREALIPKAV EALRRAKYKF P GRQKIFIS ...String:
MGRRPARCYR YCKNKPYPKS RFCRGVPDAK IRIYDMGLKG ADVDDFPYAV HIVSGEYEQI SSEALEAARI CANKFMVKAG GKESFHIRV RVHPFHVLRI NKMLSCAGAD RLQTGMRRAF GKPNGVVARV NIGQILMSVR TREALIPKAV EALRRAKYKF P GRQKIFIS NKWGFTKFSR DDYLKYQAEG RLENKGAHAK WIPAHGPLSK VFPQLANVHV PLDPKIVSP

UniProtKB: Ribosomal protein L10

+
Macromolecule #26: 60S ribosomal protein eL19

MacromoleculeName: 60S ribosomal protein eL19 / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 22.632086 KDa
SequenceString: MVSQYFVGHI TLLQNLRLQK RLAASVLKCG KGRVWLDPNE GNEIAMANSR FSIRKLVGDG LIIKKAVAPH SRYRIRMMNA SKRLGRHSG IGKRKGSQNA RQPSKLLWMR RQRVLRRMLK KLRDSKKMDS HMYQNFYMRC KGNQFKNKRV LLEAIHGQKN M WVKQKAEA ...String:
MVSQYFVGHI TLLQNLRLQK RLAASVLKCG KGRVWLDPNE GNEIAMANSR FSIRKLVGDG LIIKKAVAPH SRYRIRMMNA SKRLGRHSG IGKRKGSQNA RQPSKLLWMR RQRVLRRMLK KLRDSKKMDS HMYQNFYMRC KGNQFKNKRV LLEAIHGQKN M WVKQKAEA EQIEALKAKA KAIREKRKSR LAARAL

UniProtKB: Ribosomal protein L19

+
Macromolecule #27: 60S ribosomal protein eL20

MacromoleculeName: 60S ribosomal protein eL20 / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 21.649539 KDa
SequenceString:
MVKRIDAKFK PSLGQNLTHY HVVGRAAPSK KNPNPLIYRM NIFAKNAVLA KSRFWYFMRK LQKAKRSGGE ILACNVLLER KPTKVKNYG VLLRYECKTG THNMYNEYRD TSLTGAISQM YGEMAGRNKA RASVIQIIRA REIADSDCRK PRTTQLLNPK L RFPILKPQ PYVPKAERVL FSHTRPSLSL

UniProtKB: 60S ribosomal protein L18a

+
Macromolecule #28: 60S ribosomal protein eL21

MacromoleculeName: 60S ribosomal protein eL21 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 18.438717 KDa
SequenceString:
MPHSYGKRAR TRDKFSKAFR RRGMPSVGRY LQQYRVGDYV DVLCDPSVHK GMPYSYYHGK TGMVYNVTPR ALGVIIKKVV RGKQLLKRI HVHTEHVRKS RCREDFLKRV TVNDELKRQA KAEGKKIVVK RQPAPVAPGY IVKASPDSII AMDPAPFVEK Y

UniProtKB: Ribosomal protein L21

+
Macromolecule #29: 60S ribosomal protein uL24

MacromoleculeName: 60S ribosomal protein uL24 / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 16.119771 KDa
SequenceString:
MKFSNKVSSS RRKSRKAHFT ASSSKRRIIM SAPLSKELRQ KYKVRSMPIR KDDSVMVVRG HYHDREGKVT QVYRKKWKIY IERITTDKN TGESVQVGIH PSNVIITKLR MDKDRHRILE RKGQSSNKSK YTESDVKA

UniProtKB: Ribosomal protein L24 family protein

+
Macromolecule #30: 60S ribosomal protein uL30

MacromoleculeName: 60S ribosomal protein uL30 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 30.42132 KDa
SequenceString: MVLQRFIIKS FRNIPKEKCN EGLQKKVERN ELLRKIQQKK IQKYVERKRK RMLGLKKRAL HHAKEYIKKD RELIDLVRQA KAEGSFYKE ADAKVVFVVR IKGINKITPK PRLILKLFRL LQLHNGVFIK MNKATSEMLK LINPYVTFGY PTLGTIRKLL Y KRGYAKIG ...String:
MVLQRFIIKS FRNIPKEKCN EGLQKKVERN ELLRKIQQKK IQKYVERKRK RMLGLKKRAL HHAKEYIKKD RELIDLVRQA KAEGSFYKE ADAKVVFVVR IKGINKITPK PRLILKLFRL LQLHNGVFIK MNKATSEMLK LINPYVTFGY PTLGTIRKLL Y KRGYAKIG KQGARTRVRI SNDDIIDEHL GKHGIHGMED IVHQIYTCGP KFKEVTNFLW PFKLNPPRKG FVAKRHGFAE TR GGDAGNR ELLINELLRR MI

UniProtKB: 60S ribosomal protein L7

+
Macromolecule #31: 60S ribosomal protein eL34

MacromoleculeName: 60S ribosomal protein eL34 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 17.022096 KDa
SequenceString:
MVQRVVYRRQ CHYNTKSNKQ RVVKTPGGRL LVQRRVKVAQ GPKCGDCKRR LAGIAAVRPH LYRNLKKRER TVSRAYGGVR CHGCVKDRI IRAFLREEQR SLKKLVEERD ATKAAAGKTK EEKKGSTSKK ATKAEGAKES KTSKKKPTSK A

UniProtKB: Ribosomal protein L34

+
Macromolecule #32: 60S ribosomal protein eL36

MacromoleculeName: 60S ribosomal protein eL36 / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 13.093731 KDa
SequenceString:
MVVKKEMKIE APKSGITVGL NKGHITTPIP LVKSVRPSRR KGLKTSRNAL VSEVIREVCG FAPYERHMIE LIKTGSSSAQ KRALKFAKK RLGTLRRAKA KNEEMCHVVE LQRKRKA

UniProtKB: 60S ribosomal protein L36

+
Macromolecule #33: 60S ribosomal protein eL37

MacromoleculeName: 60S ribosomal protein eL37 / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 10.982885 KDa
SequenceString:
MGKCGKGTGS FGLRNGKTHI LCRRCGNRAF HNQKKRCASC GYPDKKTRGY NWSFKATRRR TTGTGRCRHL KTMPRRFKNG FRSGTTPPA KKKTGAATV

UniProtKB: Ribosomal protein L37

+
Macromolecule #34: 60S ribosomal protein eL38

MacromoleculeName: 60S ribosomal protein eL38 / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 8.077629 KDa
SequenceString:
MPRVLKDLRD YLSVLKRDDA TAVTVYKKRE RVRCSRYLYT LTVPNQAKAN KIEASIPGHL KKTVIAAKKK

UniProtKB: Ribosomal protein L38e

+
Macromolecule #35: 60S ribosomal protein eL39

MacromoleculeName: 60S ribosomal protein eL39 / type: protein_or_peptide / ID: 35 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 7.173581 KDa
SequenceString:
MVGVSSELFG ALKSTSLKKH LAKKQRQNRP LPHWFRLKTD SKIRYNAKRR YWRRTKIKI

UniProtKB: 60S ribosomal protein L39

+
Macromolecule #36: 60S ribosomal protein eL40

MacromoleculeName: 60S ribosomal protein eL40 / type: protein_or_peptide / ID: 36 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 6.393828 KDa
SequenceString:
IIEPSLVILA QKYNCEKMVC RRCYARLPPR ATNCRKKRCG RCSQLRPKKK IKGGN

UniProtKB: Ubiquitin / ribosomal protein CEP52

+
Macromolecule #37: 60S ribosomal protein eL43

MacromoleculeName: 60S ribosomal protein eL43 / type: protein_or_peptide / ID: 37 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 10.61241 KDa
SequenceString:
MSRRTKKVGL TGKYGTRYGA SLRKQARKIL LLQHASYNCT FCGKDATRWK AVGIWECKRC KRRVAGGAWS MSTSAGATIK SITERLYKQ NVESQ

UniProtKB: Ribosomal protein L37a

+
Macromolecule #38: 60S ribosomal protein eL42

MacromoleculeName: 60S ribosomal protein eL42 / type: protein_or_peptide / ID: 38 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 12.011441 KDa
SequenceString:
MVNIPKSRKT LCTGKCKKHQ LHKVTQYKKG KDSDRVQGRR RYDMKQAGFG GQTKPIFRKK AKTTKKIVLK LECTVCKKKH FANLKRCKT FELGGDKKSK GTAAGY

UniProtKB: 60S ribosomal protein L44 protein

+
Macromolecule #39: 60S ribosomal protein eL8

MacromoleculeName: 60S ribosomal protein eL8 / type: protein_or_peptide / ID: 39 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 32.207973 KDa
SequenceString: MKPTDTAKAA SVEKGGSSKG KSSSKDSKVA PMPKVLKQSK PGKQRDHIFE STPKDFRIGG AIRPRMDLTR YVKWPKYVRI QRQRRVLLQ RLKIPPAINQ FNYTIDKSQA HQLLKLLNKY KPETRKEKAS RLLADANAIA QGQEVAPKKP YMLKSGLSHV T NLVEYKKA ...String:
MKPTDTAKAA SVEKGGSSKG KSSSKDSKVA PMPKVLKQSK PGKQRDHIFE STPKDFRIGG AIRPRMDLTR YVKWPKYVRI QRQRRVLLQ RLKIPPAINQ FNYTIDKSQA HQLLKLLNKY KPETRKEKAS RLLADANAIA QGQEVAPKKP YMLKSGLSHV T NLVEYKKA KLVVIAHDVD PLELVLWLPT LCRKKEVPYC IIKGKSRLGK LVHKKTAAVV AIDNIRKEDQ AEFDSMVNAF TA MFNDNVE LRRRWGGHIM GVKSQHAQAK KEALIAMENA KKLGLAFG

UniProtKB: 60S ribosomal protein L7a

+
Macromolecule #40: 40S ribosomal protein eS1

MacromoleculeName: 40S ribosomal protein eS1 / type: protein_or_peptide / ID: 40 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 30.101482 KDa
SequenceString: MAVGKNKRVS KGKKGSKKKI VDPFLKKEWY TLKAPVMFHV RNFGQTLVTK TQGTKLASDG LKNRVFEISL ADLNADEDQA YRKIKLCCE DVQGRNCLTN FHGSSITRDK LCSLIRKNYS LIEAYTDVKT TDGYMLRMFC IGYTKRRPGQ LKSTCYVRTS K TRIIRRKM ...String:
MAVGKNKRVS KGKKGSKKKI VDPFLKKEWY TLKAPVMFHV RNFGQTLVTK TQGTKLASDG LKNRVFEISL ADLNADEDQA YRKIKLCCE DVQGRNCLTN FHGSSITRDK LCSLIRKNYS LIEAYTDVKT TDGYMLRMFC IGYTKRRPGQ LKSTCYVRTS K TRIIRRKM VQVMQREAST TSLREVVKKI IPESIGKEIE KACKNVFPLQ NVLIRKIKVL KKPKFDLTKL MEVHTDLSEN SG HGMKIKE SDEAANLLTK ELVASSA

UniProtKB: Small ribosomal subunit protein eS1

+
Macromolecule #41: 40S ribosomal protein uS2

MacromoleculeName: 40S ribosomal protein uS2 / type: protein_or_peptide / ID: 41 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 31.06767 KDa
SequenceString: MMVQNTTQTE FTPDEDNIRM MLTCKVHIGT KNVENKMKKY VFTRTQEGVH LIDLSWTLKK IKLAARAIVA VSNPAEVVVV SARPYGSRA VLKFSHYVGS QPIAGSWIPG TLTNQITEKF IEPRLMIATD PRTDAQAIKE SSYVSLPVVA LCDTDSPLQC V DIAIPCNN ...String:
MMVQNTTQTE FTPDEDNIRM MLTCKVHIGT KNVENKMKKY VFTRTQEGVH LIDLSWTLKK IKLAARAIVA VSNPAEVVVV SARPYGSRA VLKFSHYVGS QPIAGSWIPG TLTNQITEKF IEPRLMIATD PRTDAQAIKE SSYVSLPVVA LCDTDSPLQC V DIAIPCNN KGKKSIALMY WLLAREVLYL RNQIKRGTPW DVMVDTFFWR DAEQLEIKSE EQKREEPAAT TRPAIMSHIE GD WHQMQTP QAASDWKLMG AGADEWGNFV DARTTWQ

UniProtKB: Small ribosomal subunit protein uS2

+
Macromolecule #42: 40S ribosomal protein uS4

MacromoleculeName: 40S ribosomal protein uS4 / type: protein_or_peptide / ID: 42 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 21.626414 KDa
SequenceString:
MVGSYRNYSK TFRKPKRPFE KERLDQELKL IGEYGLKNKR EVWRVQYVLS KIRSAARYLL TLDEKDSKRL FQGDALLRRM VRYGLMGEN EQKLDFVLGL TLNKMMERRL QTKVFKLGLA KSIHHARCMI RQRHIRVGKQ VVDIPSFMVR VDSEKHIDFA L TSPFGGGR PGRVHRKTLR GGSSEE

UniProtKB: 40S ribosomal subunit protein S9

+
Macromolecule #43: 40S ribosomal protein eS4

MacromoleculeName: 40S ribosomal protein eS4 / type: protein_or_peptide / ID: 43 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 30.192227 KDa
SequenceString: MVRFSSPGRG IKKHMKRINA PSHWLLDKLS GRYAPKPSPG PHKSTECLPL ILLIRNRLKY ALTYDEVKLI VMQKVVRIDG KVRTDITYP IGYMDVVSLE RTNEHFRLLY DTKGRFIPHK ITAEEAAYKL CRVTKTFLGP KEVGMAVTHD GRTIRCVHPD V KPGDSLRI ...String:
MVRFSSPGRG IKKHMKRINA PSHWLLDKLS GRYAPKPSPG PHKSTECLPL ILLIRNRLKY ALTYDEVKLI VMQKVVRIDG KVRTDITYP IGYMDVVSLE RTNEHFRLLY DTKGRFIPHK ITAEEAAYKL CRVTKTFLGP KEVGMAVTHD GRTIRCVHPD V KPGDSLRI DIETGKVLDF LKFDVGNLVM ITGGHNQGRV GTIVQKERHP GSFDLIHVRD ETGSSFSTRS SNVFVIGIGD KN YISLPKD KGIRRSIIED RQLRLARAH

UniProtKB: 40S ribosomal protein S4

+
Macromolecule #44: 40S ribosomal protein uS5

MacromoleculeName: 40S ribosomal protein uS5 / type: protein_or_peptide / ID: 44 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 21.10357 KDa
SequenceString: QPTLTDSKLS DDVVKIVPVQ KQTNAGQRTR FKVFVAIGDF NGHCGLGTKC AKEVATAIRG AIIAAKLSLI PVRRGYWGNM IGEPHTVPM KVSGKCGSVR ARLVPAPRGT QIVGAPTTKK LLQFAGIKDC FSCSSGSTKT RGNFLKAIFA ALSATYGYLT P DLWRQVKL ...String:
QPTLTDSKLS DDVVKIVPVQ KQTNAGQRTR FKVFVAIGDF NGHCGLGTKC AKEVATAIRG AIIAAKLSLI PVRRGYWGNM IGEPHTVPM KVSGKCGSVR ARLVPAPRGT QIVGAPTTKK LLQFAGIKDC FSCSSGSTKT RGNFLKAIFA ALSATYGYLT P DLWRQVKL PPSIYEEFAS FLVSGKSYVK PEAAAYYA

UniProtKB: Small ribosomal subunit protein uS5

+
Macromolecule #45: 40S ribosomal protein eS6

MacromoleculeName: 40S ribosomal protein eS6 / type: protein_or_peptide / ID: 45 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 27.559588 KDa
SequenceString: MKLNIANPYT NMQKTVEVDD EKRLLPFFEK RMGTQVPGDS LGDEYKGYVF KISGGNDKQG FPMMQGVLTT SRVRLLLKKG SKCYRPRRT GEMRRKSVRG CIASPDLSIL NLVVVKKGEQ DIPGLTDEDR PRRLGPKRAS KIRRLFNLKP GDDVRKYVIR R KVEGRNKT ...String:
MKLNIANPYT NMQKTVEVDD EKRLLPFFEK RMGTQVPGDS LGDEYKGYVF KISGGNDKQG FPMMQGVLTT SRVRLLLKKG SKCYRPRRT GEMRRKSVRG CIASPDLSIL NLVVVKKGEQ DIPGLTDEDR PRRLGPKRAS KIRRLFNLKP GDDVRKYVIR R KVEGRNKT RAPKIQRLVT PQRIQRKRRR IALREKKEAT SRETLKAYFK MMEEYKSSKL AAITAANKEA ASKKAKKAIK K

UniProtKB: 40S ribosomal protein S6

+
Macromolecule #46: 40S ribosomal protein eS7

MacromoleculeName: 40S ribosomal protein eS7 / type: protein_or_peptide / ID: 46 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 22.069975 KDa
SequenceString: MKSETDAKIV GNKEPTPLEK EIAKCLLYIQ TSGNADLKGD VKNVVISHCK EVEVGALKKS AIIIFVPHRV YMNHVRRIHG RLVVELEKK TKKHVVIIAQ RTILAKNYKG KQFRIRPRSR TLTSVQEAII EDIAAPTEIV GKVVRVKQDG TRVLRVFLDP K DKQNDNVE ...String:
MKSETDAKIV GNKEPTPLEK EIAKCLLYIQ TSGNADLKGD VKNVVISHCK EVEVGALKKS AIIIFVPHRV YMNHVRRIHG RLVVELEKK TKKHVVIIAQ RTILAKNYKG KQFRIRPRSR TLTSVQEAII EDIAAPTEIV GKVVRVKQDG TRVLRVFLDP K DKQNDNVE DKLETFAAIY KKLTNKEVIF SFKVNA

UniProtKB: 40S ribosomal protein S7

+
Macromolecule #47: 40S ribosomal protein uS8

MacromoleculeName: 40S ribosomal protein uS8 / type: protein_or_peptide / ID: 47 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 14.857508 KDa
SequenceString:
MVRMSVLADC LKTIVNAEKK GKRHVLIRPS SRVIVKFLLC MQKHGYIGEF HIVDDHRSGK IVIELLGRIN KCAVVSPRYD IALDDIEQW SSNILPSRQF GHLVLTTAYG IMDHEEARRK HTGGKILGFF F

UniProtKB: Ribosomal protein S8 family protein

+
Macromolecule #48: 40S ribosomal protein eS8

MacromoleculeName: 40S ribosomal protein eS8 / type: protein_or_peptide / ID: 48 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 21.948422 KDa
SequenceString: MGISRDSRHK RRLTGGRFPV HKHKRKHELA RRPSNTKLGT KLVRKVRCRG GNLKFRALRL DSGNFSWASK NVCRKTRIMD VVYNASSNE LVRTKTLVKN CLVTIDATPF KIWFKNTYGF DIVAPKGEAA EEANAENDAS KYVSKSLLEQ FASGRLFACV S SRPGQTGR ...String:
MGISRDSRHK RRLTGGRFPV HKHKRKHELA RRPSNTKLGT KLVRKVRCRG GNLKFRALRL DSGNFSWASK NVCRKTRIMD VVYNASSNE LVRTKTLVKN CLVTIDATPF KIWFKNTYGF DIVAPKGEAA EEANAENDAS KYVSKSLLEQ FASGRLFACV S SRPGQTGR CDGYILEGDE LNFYRKRMDK KKRA

UniProtKB: 40S ribosomal protein S8

+
Macromolecule #49: 40S ribosomal protein uS12

MacromoleculeName: 40S ribosomal protein uS12 / type: protein_or_peptide / ID: 49 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 16.201044 KDa
SequenceString:
MGSGVPRGIR AARKLKNRRR RERWADKAYK KAHLGTRWKC NPFKGSSHAK GIVVEKIAIE AKQPNSAYRK SVRVQLIKNG KKITAFVPR DGCLNYIDEN DEVLVAGLGR SGHSVGDLPG VRFKVVKVAG VSLLALYKEK KEKPRS

+
Macromolecule #50: 40S ribosomal protein uS15

MacromoleculeName: 40S ribosomal protein uS15 / type: protein_or_peptide / ID: 50 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 17.45568 KDa
SequenceString:
MGRMYGKGKG ISSSSIPYRR KPASWVKTKP YDLEEQIVKF AKKGMTPSQI GVALRDSNAV PLVKAITNNK ILRILRNHGW APDIPEDLY FLVKKAVVMR KHMEHNLNDK DSKFRLILLE SRIHRLARYC KKKRRLPANW KYKSETASAL LG

UniProtKB: 40S ribosomal protein S13

+
Macromolecule #51: 40S ribosomal protein uS17

MacromoleculeName: 40S ribosomal protein uS17 / type: protein_or_peptide / ID: 51 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 18.190637 KDa
SequenceString:
MDRGGAQVYK AYQKQPTISV MKLQKLGRKS RYWKDVGMGF VTPKEAKEGT YIDKKCPFTG NVSIRGRIIK GMVISTKMKR TIIMRVNYL HYVKKYNRFE KRHKNIPCHC SPCFDVNAGD IVTVGQCRPL SKTVRFNVLK VEKNQIFGNP RKQFRLF

UniProtKB: Small ribosomal subunit protein uS17

+
Macromolecule #52: 40S ribosomal protein eS21

MacromoleculeName: 40S ribosomal protein eS21 / type: protein_or_peptide / ID: 52 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 8.720714 KDa
SequenceString:
MINDDGKLVD LYIPRKCSAT SRLLPAQDHG SIQITIGLTD ENGVYNNQNV SFALSHTMRS TGDGDEAMNR LFKEQGLLD

UniProtKB: 40S ribosomal protein S21

+
Macromolecule #53: 40S ribosomal protein eS26

MacromoleculeName: 40S ribosomal protein eS26 / type: protein_or_peptide / ID: 53 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 13.26262 KDa
SequenceString:
MPTKRRNGGR SKHARGRVRP IRCSNCGRSV PKDKAVKRFN VRNIVDASSQ RDIKDACAFS TFNLPKLYIK QCYCISCAIH SRVVRVRSV EARKIRTYVQ PRSMPVKINM PQNKDN

UniProtKB: 40S ribosomal protein S26

+
Macromolecule #54: 40S ribosomal protein eS27

MacromoleculeName: 40S ribosomal protein eS27 / type: protein_or_peptide / ID: 54 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 9.160783 KDa
SequenceString:
MEFDCLHVDP KEEAKKHKLK RLVQNPNSFF MDVRCPGCLT ITTIFSHAQT AVICGSCNIV LSEPTGGKCR LTKGCSFRKK AE

UniProtKB: 40S ribosomal protein S27

+
Macromolecule #55: 40S ribosomal protein eS30

MacromoleculeName: 40S ribosomal protein eS30 / type: protein_or_peptide / ID: 55 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 6.826048 KDa
SequenceString:
MAVKVHGSLA RAGKVRNHTP KVATLEKRKP PTGRAKKRQQ YNRRFTNAVG VRGKGPNMQR A

UniProtKB: 40S ribosomal protein S30

+
Macromolecule #56: 40S ribosomal protein uS3

MacromoleculeName: 40S ribosomal protein uS3 / type: protein_or_peptide / ID: 56 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 24.78802 KDa
SequenceString: MLNSAGKSKR RKFINDGVFN AELNELLSRV LAEDGYSGVE LRITPVRTEI IIRATRTREV LGEKAKRIRE LTSLVQKRFG FSPDTVELY AERVEHKGLC AMAQAESLRY KLLKGLAVRR AAYGVLRHIM ESGAKGCEVI VSGKLRAQRA KSMKFKDGYI I STGHPAQI ...String:
MLNSAGKSKR RKFINDGVFN AELNELLSRV LAEDGYSGVE LRITPVRTEI IIRATRTREV LGEKAKRIRE LTSLVQKRFG FSPDTVELY AERVEHKGLC AMAQAESLRY KLLKGLAVRR AAYGVLRHIM ESGAKGCEVI VSGKLRAQRA KSMKFKDGYI I STGHPAQI FVASATRSVQ LRQGVLGIKV KIMLPHDPEG RLGPSTILPD TITVLEPKAD VEFSK

UniProtKB: 40S ribosomal protein S3

+
Macromolecule #57: 40S ribosomal protein uS7

MacromoleculeName: 40S ribosomal protein uS7 / type: protein_or_peptide / ID: 57 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 21.552201 KDa
SequenceString: MTAEVALFRK WSYDGVSLSD LSLVDCIAIQ GKARVFTPHT AGRYQKKRFR KTLCPIVERL VNSMMMHGRN NGKKLKAIRI VMHAFEIIH LMTDQNPLQV FVDAVKNGGP REDSTRIGSA GVVRRQAVDV SPLRRVNQAI YLICTGARNA AFRNIKTIAE C LADEIVNC ...String:
MTAEVALFRK WSYDGVSLSD LSLVDCIAIQ GKARVFTPHT AGRYQKKRFR KTLCPIVERL VNSMMMHGRN NGKKLKAIRI VMHAFEIIH LMTDQNPLQV FVDAVKNGGP REDSTRIGSA GVVRRQAVDV SPLRRVNQAI YLICTGARNA AFRNIKTIAE C LADEIVNC AKESPSSYAI KKKDEIERVA KANR

+
Macromolecule #58: 40S ribosomal protein uS9

MacromoleculeName: 40S ribosomal protein uS9 / type: protein_or_peptide / ID: 58 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 16.708727 KDa
SequenceString:
MVKELIKGKG QRVQTFGRKK RAVAVALCTR GSGIIRVNGR PLDSIRPDAL RTKVLEPLYV MGAKRVSKVD IRLRVRGGGF TSQVYAIRQ AISKAVVAFH QKFVDEASKK KIADELVSYD RSLLIADPRR CEPKKFGGPG ARARYQKSYR

UniProtKB: Ribosomal protein S16

+
Macromolecule #59: 40S ribosomal protein uS10

MacromoleculeName: 40S ribosomal protein uS10 / type: protein_or_peptide / ID: 59 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 13.527627 KDa
SequenceString:
MVDAAMKDSK IAGELDDANR IHMIRVTLTS MNLKSLENAC REMINGAKEK DLRVSGPVRM PVRTLKITTR KSPVGEGTNT WDRFEARIY KRVIHLHSSS EVVCQLTSFP FDSSVDVEIT I

UniProtKB: Small ribosomal subunit protein uS10

+
Macromolecule #60: 40S ribosomal protein eS12

MacromoleculeName: 40S ribosomal protein eS12 / type: protein_or_peptide / ID: 60 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 14.71685 KDa
SequenceString:
MAEEGVPEAV ETVQTPEDDL QKLLHLALSN GCLIRGIHQV TKAIESKKAQ VCVVSKQCSE PAYLQLIQVL CKEHDVILIE TEHDSKTIG EWSGLCKYDI EGVARNIVGA TSVAVTAIDE NSEALDEMKK LVSALK

UniProtKB: 40S ribosomal protein S12

+
Macromolecule #61: 40S ribosomal protein uS13

MacromoleculeName: 40S ribosomal protein uS13 / type: protein_or_peptide / ID: 61 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 17.521484 KDa
SequenceString:
MAIQITTADQ FQHILRILNT NVDGREKVTV ALTAIRGIGR RMATVVCKVA GIDVSKRAGE LTNDEINKVI TIISSPADVM IPAWFLNRQ KDYKEGKNLH NTANMLDTCL REDLERMKKM RLHRGLRHYW GLRTRGQHTK TTGRHGRTVG VAKKK

UniProtKB: 40S ribosomal protein S18

+
Macromolecule #62: 40S ribosomal protein uS14

MacromoleculeName: 40S ribosomal protein uS14 / type: protein_or_peptide / ID: 62 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 7.511788 KDa
SequenceString:
MPSLYNTHPK TYGPGSHQCR VCFNRHGLIR KYGLSICRQC FRERANLIGF HKVGACVTID ILCSTE

UniProtKB: Ribosomal protein S14p/S29e

+
Macromolecule #63: 40S ribosomal protein uS19

MacromoleculeName: 40S ribosomal protein uS19 / type: protein_or_peptide / ID: 63 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 17.246469 KDa
SequenceString:
MPQADQTTQV NRKRTFRTFK FRGYELEKLL EMPMASLVPL LRARQRRRIS RGLKKPVRTL LKKLRDAKKD LAYGEKPEPV KTHLRDTII IPEMIGSIVG VYNGKQYINV EIKPEMVGYY IGEFSITYKP VMHGKPGIGA THSSRFIPLK

UniProtKB: 40S ribosomal protein S15

+
Macromolecule #64: 40S ribosomal protein eS28

MacromoleculeName: 40S ribosomal protein eS28 / type: protein_or_peptide / ID: 64 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 7.500716 KDa
SequenceString:
MEQPKLAKVN KVLGRTGSRG GVTQVRVDFM GEGGWEGRVL IRNVKGPVRE GDILALLETE REARRLR

UniProtKB: 40S ribosomal protein S28

+
Macromolecule #65: Receptor for activated C kinase 1, RACK1 protein

MacromoleculeName: Receptor for activated C kinase 1, RACK1 protein / type: protein_or_peptide / ID: 65 / Details: Receptor for Activated C Kinase 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 35.57327 KDa
SequenceString: MSNSVLTYKG VLTGGHTGWV TSISCPGRTD VNTVISASRD KKLMIWEVYP QDVDGEVGIA KKSLTGHSQT VQDVTMSFDG LFALSGSWD GTLRLWDLVK AETVRVFNGH TKDVNSVAFS PDNRQIISGS RDKTIKLWNT VSECKKTITN NCHTDWISCV R FSPNLHEP ...String:
MSNSVLTYKG VLTGGHTGWV TSISCPGRTD VNTVISASRD KKLMIWEVYP QDVDGEVGIA KKSLTGHSQT VQDVTMSFDG LFALSGSWD GTLRLWDLVK AETVRVFNGH TKDVNSVAFS PDNRQIISGS RDKTIKLWNT VSECKKTITN NCHTDWISCV R FSPNLHEP VFVSGGWDKL VKVWDLGSCN LKCNLTGHEG IVSSVSISPD GSLCASGGKD GIARLWDMKE GNSLHLLEAG SP INALCFS PRNYWLCVAT DKVIKIWNLE NKKVIAEIAS EKPKKVGLPW CISLCWDTEG NTLYAGSTDG NIYVYQVNKN YNY NAN

UniProtKB: Receptor for activated C kinase, RACK protein

+
Macromolecule #66: 40S ribosomal protein eS10

MacromoleculeName: 40S ribosomal protein eS10 / type: protein_or_peptide / ID: 66 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 13.146534 KDa
SequenceString:
MTVAGMKYSL IPRENKVLIY QYLINEGVLV CQKSPKIPVH PHINVPNLHV MMTMKSLKSR NYVIEHYNWQ HLYFVLTDQG IEYLRNFLY LPPTVFPATH SKKTASKVLL KEGA

UniProtKB: Plectin/S10 domain containing protein

+
Macromolecule #67: 40S ribosomal protein eS24

MacromoleculeName: 40S ribosomal protein eS24 / type: protein_or_peptide / ID: 67 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 15.640566 KDa
SequenceString:
MASTDQFSIR VKKFMNNPLL ARKQFCLDVL HPGRANVSKN DLRDRIAKQF KLKDPKTLVL FGFKTYFGGG RSSGYCVIYD NLASLKKYE RRYRQVRLGL EEAPKAMGRR AKKELKNRRK KVRGKEKAKC SGGKKK

UniProtKB: 40S ribosomal protein S24 protein

+
Macromolecule #68: 40S ribosomal protein eS25

MacromoleculeName: 40S ribosomal protein eS25 / type: protein_or_peptide / ID: 68 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 11.915305 KDa
SequenceString:
MAVKEKKSKE AVMKAAMASR GKRKKWVKVK TKDKINNAIF FEKATYDKML AEIPKCRLIT VSTISEKLKV NGSLARQALA QLEEMNLIK PLCDQHHAQR LYTKV

UniProtKB: 40S ribosomal protein S25

+
Macromolecule #69: 40S ribosomal protein eS31

MacromoleculeName: 40S ribosomal protein eS31 / type: protein_or_peptide / ID: 69 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 8.897688 KDa
SequenceString:
GKKRKKKQYT TPKKIKHKKK KVALSVLKFY KVEGDKVVRL LKECPNNTCG KGVFMASHHN RTYCGRCGLT YMLNADE

UniProtKB: Ribosomal protein S27a family protein

+
Macromolecule #70: 60S ribosomal protein eL41

MacromoleculeName: 60S ribosomal protein eL41 / type: protein_or_peptide / ID: 70
Details: Using T. gondii as a reference sequence (TGME49_213580), led us to identify the unannotated genomic sequence corresponding to eL41 in the B. divergens 1802 reference strain (JAHBMH010000034: ...Details: Using T. gondii as a reference sequence (TGME49_213580), led us to identify the unannotated genomic sequence corresponding to eL41 in the B. divergens 1802 reference strain (JAHBMH010000034: 30674..30988 supercontig).
Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 5.136324 KDa
SequenceString:
MSHGASRYKK ARAKMRWKWK KKRTRRLQRK RRKMRQRSR

+
Macromolecule #71: 40S ribosomal protein eS17

MacromoleculeName: 40S ribosomal protein eS17 / type: protein_or_peptide / ID: 71
Details: eS17 was not identified in B. divergens 1802A. However, P. falciparum PF3D7_1242700 identified B. bovis sequence BBOV_III001250. This latter sequence was used as a blast search against the B. ...Details: eS17 was not identified in B. divergens 1802A. However, P. falciparum PF3D7_1242700 identified B. bovis sequence BBOV_III001250. This latter sequence was used as a blast search against the B. divergens Rouen strain, which identified the supercontig CCSG02000001.1: 1890202..1890772. This is the sequence, which was built in the density, and for which the sequence is provided.
Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 15.455984 KDa
SequenceString:
MGGVRTKTVK RAARQIVEKY YGKLGLDFHF NKKVAEEVAL IPSKRMRNKV AGFITHLMRR IQKGPVRGIS LKLQEEERER RMDFVPERS EVDVPLIQID QDTADMLSFL KMNIPNVKVI TSNSHGDGPH GHQRY

+
Macromolecule #72: 40S ribosomal protein uS11

MacromoleculeName: 40S ribosomal protein uS11 / type: protein_or_peptide / ID: 72 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 16.68308 KDa
SequenceString:
MASTEEAKPT TTKESAAPVV SAPLGPQNKG DQVFGVAHIF ASFNDTFIHV TDLSGRETLV RVTGGMKVKA DRDESSPYAA MMAAQDVAA RLKELGITAV HIKLRATGGT RSKTPGPGAQ SALRSLARSG LKIGRIEDVT PIPT(IAS)STRRK CGRRGRR L

UniProtKB: 40S ribosomal subunit protein S14

+
Macromolecule #77: 60S ribosomal protein uL1

MacromoleculeName: 60S ribosomal protein uL1 / type: protein_or_peptide / ID: 77 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 24.471613 KDa
SequenceString: MSKLSLDTLN EAITAILTQS QTKKRNFVET VELQISLKDY DTQRDKRFSG SVVLQNIPRQ RLSVCVFGDQ VHCDQAKSLG IDYIDLEGL KKFNRNKTLV KKLANKYGAF LASQTLLPQI PRYLGPGLNK AGKFPTQLTH NDNMAEKVRE IKASVKFQLK K VLCMGVAV ...String:
MSKLSLDTLN EAITAILTQS QTKKRNFVET VELQISLKDY DTQRDKRFSG SVVLQNIPRQ RLSVCVFGDQ VHCDQAKSLG IDYIDLEGL KKFNRNKTLV KKLANKYGAF LASQTLLPQI PRYLGPGLNK AGKFPTQLTH NDNMAEKVRE IKASVKFQLK K VLCMGVAV GNVEMTPDQL RANIVLAINY LVSLLKKNWH NVRGLTIKST MGKPQRIYG

UniProtKB: Ribosomal protein L1

+
Macromolecule #78: 60S ribosomal protein uL23

MacromoleculeName: 60S ribosomal protein uL23 / type: protein_or_peptide / ID: 78 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 17.344486 KDa
SequenceString:
MGKSPSNKGT EADKVKKAKI AANSVKKATT VKGHKIRRNT HFFRNRTLAL PRTPKFKRHV RTALSKKLDK FSIIKYPLTT EKSMKMIEE INTLVFIVDS RANKEKIARA VSELYDVKCV RVNTLNRPDG LKKAYVRVSP DQDALDVANK IGII

UniProtKB: 60S ribosomal protein L23

+
Macromolecule #79: 60S ribosomal protein eL24

MacromoleculeName: 60S ribosomal protein eL24 / type: protein_or_peptide / ID: 79 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 17.452795 KDa
SequenceString:
MATVTTTIKT ELCSFSDYRV YPGRGQKFIA RDGKVYFFIN SKSASLHKQR IKPAKVKWTP SWRKANKKFQ TEVSHRRRSK KAAKMQKAF LGLSLDDLKA KRAAAAKVEP KLHAKQAMIA EAKEKAKKLK GTSSKAAVVA PKQPAIPKKA TKAAMHK

UniProtKB: Ribosomal protein L24e

+
Macromolecule #80: 40S ribosomal protein eS19

MacromoleculeName: 40S ribosomal protein eS19 / type: protein_or_peptide / ID: 80 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Babesia divergens (eukaryote) / Strain: Rouen 1987
Molecular weightTheoretical: 20.157379 KDa
SequenceString:
MELALDKQMI KLGRFDDEVP YRRINTSLKD CNPDVFIAAF AQQMELKNYI DPPKWIDYAK TSVAKELAPQ NPKWFYIRSA AILRHLYFH PDEGIGRLRR VYSSRKRRGC APNHSCLASG KIIRTIVQQL EANGFLEKSK DNKGRRLSRR GCNIVNEFAR H LTRSLVDN KKGVAK

UniProtKB: 40S ribosomal protein S19

+
Macromolecule #81: MAGNESIUM ION

MacromoleculeName: MAGNESIUM ION / type: ligand / ID: 81 / Number of copies: 136 / Formula: MG
Molecular weightTheoretical: 24.305 Da

+
Macromolecule #82: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 82 / Number of copies: 5 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

+
Macromolecule #83: POTASSIUM ION

MacromoleculeName: POTASSIUM ION / type: ligand / ID: 83 / Number of copies: 26 / Formula: K
Molecular weightTheoretical: 39.098 Da

+
Macromolecule #84: water

MacromoleculeName: water / type: ligand / ID: 84 / Number of copies: 34 / Formula: HOH
Molecular weightTheoretical: 18.015 Da
Chemical component information

ChemComp-HOH:
WATER

-
Experimental details

-
Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

-
Sample preparation

BufferpH: 7.4
Component:
ConcentrationName
20.0 mMHEPES
150.0 mMPotassium acetate
10.0 mMAmmonium acetate
10.0 mMMagnesium acetate
5.0 mM2-mercaptoethanol
GridModel: Quantifoil R1.2/1.3 / Material: COPPER / Mesh: 300 / Support film - Material: CARBON / Support film - topology: HOLEY / Pretreatment - Type: GLOW DISCHARGE / Pretreatment - Time: 30 sec. / Pretreatment - Atmosphere: AIR / Pretreatment - Pressure: 0.037 kPa
Details: The grid had an additional ultrathin continuous carbon layer (2 nm)
VitrificationCryogen name: ETHANE / Chamber humidity: 100 % / Chamber temperature: 277.15 K / Instrument: FEI VITROBOT MARK IV

-
Electron microscopy

MicroscopeTFS KRIOS
Image recordingFilm or detector model: GATAN K3 (6k x 4k) / Number real images: 12144 / Average exposure time: 1.4 sec. / Average electron dose: 42.0 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsC2 aperture diameter: 50.0 µm / Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Cs: 2.7 mm / Nominal defocus max: 2.2 µm / Nominal defocus min: 0.8 µm / Nominal magnification: 105000
Sample stageSpecimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER / Cooling holder cryogen: NITROGEN
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

+
Image processing

Particle selectionNumber selected: 1259788
CTF correctionType: PHASE FLIPPING AND AMPLITUDE CORRECTION
Startup modelType of model: INSILICO MODEL
Final reconstructionNumber classes used: 1 / Resolution.type: BY AUTHOR / Resolution: 2.7 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: RELION (ver. 30001) / Number images used: 261009
Initial angle assignmentType: MAXIMUM LIKELIHOOD
Final angle assignmentType: MAXIMUM LIKELIHOOD

-
Atomic model buiding 1

Initial model
ChainDetailsPDB ID
source_name: AlphaFold, initial_model_type: in silico modelribosomal proteins
chain_id: A, source_name: PDB, initial_model_type: experimental modelinitial model consisted of conserved 18S regions

5xxu

chain_id: A, source_name: PDB, initial_model_type: experimental modelinitial model consisted of conserved 28S regions

5xxb

chain_id: B, source_name: PDB, initial_model_type: experimental modelinitial model consisted of conserved 5S regions

5xxb

chain_id: C, source_name: PDB, initial_model_type: experimental modelinitial model consisted of conserved 5.8S regions

5xxb

chain_id: m, source_name: PDB, initial_model_type: experimental modeleL41

5xxb

chain_id: 7, source_name: PDB, initial_model_type: experimental modelE-site tRNA

3j7a

DetailsInitial docking and fitting was done in UCSF ChimeraX for the ribosomal proteins using AlphaFold2 predicted models, except for eL41; the T. gondii eL41 chain (PDB 5XXB) served as the initial model. The T. gondii PDBs 5XXU and 5XXB were also fit with UCSF ChimeraX and used for initial model building of the Babesia divergens rRNAs.
RefinementProtocol: RIGID BODY FIT
Output model

PDB-9ygm:
Babesia divergens ribosome structure by single-particle cryo-EM (3D class3, E-site tRNA)

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more