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Structure paper

TitleStructural analysis of the full-length human LRRK2.
Journal, issue, pagesCell, Vol. 184, Issue 13, Page 3519-3527.e10, Year 2021
Publish dateJun 24, 2021
AuthorsAlexander Myasnikov / Hanwen Zhu / Patricia Hixson / Boer Xie / Kaiwen Yu / Aaron Pitre / Junmin Peng / Ji Sun /
PubMed AbstractMutations in leucine-rich repeat kinase 2 (LRRK2) are commonly implicated in the pathogenesis of both familial and sporadic Parkinson's disease (PD). LRRK2 regulates critical cellular processes at ...Mutations in leucine-rich repeat kinase 2 (LRRK2) are commonly implicated in the pathogenesis of both familial and sporadic Parkinson's disease (PD). LRRK2 regulates critical cellular processes at membranous organelles and forms microtubule-based pathogenic filaments, yet the molecular basis underlying these biological roles of LRRK2 remains largely enigmatic. Here, we determined high-resolution structures of full-length human LRRK2, revealing its architecture and key interdomain scaffolding elements for rationalizing disease-causing mutations. The kinase domain of LRRK2 is captured in an inactive state, a conformation also adopted by the most common PD-associated mutation, LRRK2. This conformation serves as a framework for structure-guided design of conformational specific inhibitors. We further determined the structure of COR-mediated LRRK2 dimers and found that single-point mutations at the dimer interface abolished pathogenic filamentation in cells. Overall, our study provides mechanistic insights into physiological and pathological roles of LRRK2 and establishes a structural template for future therapeutic intervention in PD.
External linksCell / PubMed:34107286 / PubMed Central
MethodsEM (single particle)
Resolution3.1 - 3.8 Å
Structure data

EMDB-23350, PDB-7lht:
Structure of the LRRK2 dimer
Method: EM (single particle) / Resolution: 3.5 Å

EMDB-23352, PDB-7lhw:
Structure of the LRRK2 monomer
Method: EM (single particle) / Resolution: 3.7 Å

EMDB-23359, PDB-7li3:
Structure of the LRRK2 G2019S mutant
Method: EM (single particle) / Resolution: 3.8 Å

EMDB-23360, PDB-7li4:
Structure of LRRK2 after symmetry expansion
Method: EM (single particle) / Resolution: 3.1 Å

Chemicals

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

Source
  • homo sapiens (human)
KeywordsTRANSFERASE / HYDROLASE / Parkinson's disease / microtubule / kinase / cryo-EM / NEUROPEPTIDE

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