PDB-6zo5: Fusidic acid binding to the TM1/TM2 groove of AcrB-G619P_G621P Method: X-RAY DIFFRACTION / Resolution: 2.5 Å
PDB-6zo6: Minocycline binding to the deep binding pocket of AcrB-G619P Method: X-RAY DIFFRACTION / Resolution: 2.35 Å
PDB-6zo7: 3-Formylrifamycin SV binding to the access pocket of AcrB-G619P L and T protomer Method: X-RAY DIFFRACTION / Resolution: 2.85 Å
PDB-6zo8: Minocycline binding to the deep binding pocket of AcrB-G621P Method: X-RAY DIFFRACTION / Resolution: 2.5 Å
PDB-6zo9: Binding of two rifabutins to the access pocket of AcrB-G621P T protomer Method: X-RAY DIFFRACTION / Resolution: 2.7 Å
PDB-6zoa: Partially induced AcrB T protomer and DDM binding to the TM8/PC2 pathway of AcrB L2 protomer Method: X-RAY DIFFRACTION / Resolution: 3.05 Å
PDB-6zob: 3-Formylrifamycin SV binding to the access pocket of AcrB L protomer Method: X-RAY DIFFRACTION / Resolution: 2.8 Å
PDB-6zoc: Erythromycin binding to the access pocket of AcrB-G616P L protomer and 3-formylrifamycin SV binding to the access pocket of AcrB-G616P T protomer Method: X-RAY DIFFRACTION / Resolution: 2.89 Å
PDB-6zod: Fusidic acid binding to the allosteric deep transmembrane domain binding pocket, TM7/TM8 groove, and TM1/TM2 groove of the fully induced AcrB T protomer Method: X-RAY DIFFRACTION / Resolution: 2.85 Å
PDB-6zoe: AcrB-F563A symmetric T protomer Method: X-RAY DIFFRACTION / Resolution: 2.85 Å
PDB-6zof: Fusidic acid binding to the TM7/TM8 groove of AcrB-F380A T protomer Method: X-RAY DIFFRACTION / Resolution: 3.3 Å
PDB-6zog: Minocycline binding to the deep binding pocket of AcrB-I38F_I671T Method: X-RAY DIFFRACTION / Resolution: 2.75 Å
PDB-6zoh: 3-Formylrifamycin SV binding to the access pocket of AcrB-G619P_G621P L and T protomers Method: X-RAY DIFFRACTION / Resolution: 2.8 Å
In the structure databanks used in Yorodumi, some data are registered as the other names, "COVID-19 virus" and "2019-nCoV". Here are the details of the virus and the list of structure data.
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)
EMDB accession codes are about to change! (news from PDBe EMDB page)
The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
The EM Navigator/Yorodumi systems omit the EMD- prefix.
Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator
Movie
Controller
Structure viewers
About Yorodumi Papers
Authors
External links
Keywords
TRANSPORT PROTEIN / Multidrug efflux pump / 
