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Structure paper

TitleDegradation of the microbial stress protectants and chemical chaperones ectoine and hydroxyectoine by a bacterial hydrolase-deacetylase complex.
Journal, issue, pagesJ. Biol. Chem., Vol. 295, Page 9087-9104, Year 2020
Publish dateJan 13, 2020 (structure data deposition date)
AuthorsMais, C.N. / Hermann, L. / Altegoer, F. / Seubert, A. / Richter, A.A. / Wernersbach, I. / Czech, L. / Bremer, E. / Bange, G.
External linksJ. Biol. Chem. / PubMed:32404365
MethodsX-ray diffraction
Resolution2 - 2.5 Å
Structure data

PDB-6twj:
Apo structure of the Ectoine utilization protein EutD (DoeA) from Halomonas elongata
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-6twk:
Substrate bound structure of the Ectoine utilization protein EutD (DoeA) from Halomonas elongata
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-6twl:
Apo structure of the Ectoine utilization protein EutE (DoeB) from Ruegeria pomeroyi
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6twm:
Product bound structure of the Ectoine utilization protein EutE (DoeB) from Ruegeria pomeroyi
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-6yo9:
Product bound structure of the Ectoine utilization protein EutD (DoeA) from Halomonas elongata
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-P4B:
(2~{R})-4-azanyl-2-[[(1~{S})-1-oxidanylethyl]amino]butanoic acid

ChemComp-4CS:
(4S)-2-METHYL-1,4,5,6-TETRAHYDROPYRIMIDINE-4-CARBOXYLIC ACID

ChemComp-ZN:
Unknown entry

ChemComp-DAB:
2,4-DIAMINOBUTYRIC ACID

ChemComp-ACT:
ACETATE ION

ChemComp-GOL:
GLYCEROL

Source
  • halomonas elongata (bacteria)
  • ruegeria pomeroyi (strain atcc 700808 / dsm 15171 / dss-3) (bacteria)
KeywordsHYDROLASE / Pita bread / ectoine degradation / zinc-dependent / deacetylase / EutE / ADABA / ectoine / compatible solutes

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