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Structure paper

TitleX-ray Crystal Structures of Short Antimicrobial Peptides as Pseudomonas aeruginosa Lectin B Complexes.
Journal, issue, pagesAcs Chem. Biol., Vol. 14, Page 758-766, Year 2019
Publish dateDec 12, 2018 (structure data deposition date)
AuthorsBaeriswyl, S. / Gan, B.H. / Siriwardena, T.N. / Visini, R. / Robadey, M. / Javor, S. / Stocker, A. / Darbre, T. / Reymond, J.L.
External linksAcs Chem. Biol. / PubMed:30830745
MethodsX-ray diffraction
Resolution1.19 - 2.541 Å
Structure data

PDB-6q6w:
Structure of Fucosylated D-antimicrobial peptide SB5 in complex with the Fucose-binding lectin PA-IIL at 1.438 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.438 Å

PDB-6q6x:
Structure of Fucosylated D-antimicrobial peptide SB6 in complex with the Fucose-binding lectin PA-IIL at 1.525 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.525 Å

PDB-6q77:
Structure of Fucosylated D-antimicrobial peptide SB12 in complex with the Fucose-binding lectin PA-IIL at 2.002 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 2.002 Å

PDB-6q79:
Structure of Fucosylated D-antimicrobial peptide SB4 in complex with the Fucose-binding lectin PA-IIL at 2.009 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 2.009 Å

PDB-6q85:
Structure of Fucosylated D-antimicrobial peptide SB11 in complex with the Fucose-binding lectin PA-IIL at 1.990 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.99 Å

PDB-6q86:
Structure of Fucosylated D-antimicrobial peptide SB4 in complex with the Fucose-binding lectin PA-IIL at 2.008 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 2.008 Å

PDB-6q87:
Structure of Fucosylated D-antimicrobial peptide SB10 in complex with the Fucose-binding lectin PA-IIL at 2.541 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 2.541 Å

PDB-6q8d:
Structure of Fucosylated D-antimicrobial peptide SB15 in complex with the Fucose-binding lectin PA-IIL at 1.630 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

PDB-6q8g:
Structure of Fucosylated D-antimicrobial peptide SB8 in complex with the Fucose-binding lectin PA-IIL at 1.190 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.19 Å

PDB-6q8h:
Structure of Fucosylated D-antimicrobial peptide SB10 in complex with the Fucose-binding lectin PA-IIL at 1.707 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.707 Å

PDB-6s5p:
Cfucosylated peptide SBL2 bound to Fucose binding Lectin LecB (PA-IIL) from Pseudomonas aeruginosa at 1.46 Angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 1.46 Å

Chemicals

ChemComp-CA:
Unknown entry

ChemComp-ZDC:
3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid

ChemComp-NH2:
AMINO GROUP

ChemComp-HOH:
WATER

Source
  • pseudomonas aeruginosa (bacteria)
  • synthetic construct (others)
KeywordsANTIBIOTIC / Antimicrobial / Lectin / Complex / SUGAR BINDING PROTEIN / Fucosylated

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