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Structure paper

TitleHydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III.
Journal, issue, pagesJ. Biol. Chem., Vol. 291, Page 25019-25031, Year 2016
Publish dateJun 23, 2016 (structure data deposition date)
AuthorsEsser, L. / Zhou, F. / Zhou, Y. / Xiao, Y. / Tang, W.K. / Yu, C.A. / Qin, Z. / Xia, D.
External linksJ. Biol. Chem. / PubMed:27758861
MethodsX-ray diffraction
Resolution2.652 - 2.996 Å
Structure data

PDB-5kkz:
Rhodobacter sphaeroides bc1 with famoxadone
Method: X-RAY DIFFRACTION / Resolution: 2.97 Å

PDB-5kli:
Rhodobacter sphaeroides bc1 with stigmatellin and antimycin
Method: X-RAY DIFFRACTION / Resolution: 2.996 Å

PDB-5klv:
Structure of bos taurus cytochrome bc1 with fenamidone inhibited
Method: X-RAY DIFFRACTION / Resolution: 2.652 Å

Chemicals

ChemComp-HEM:
PROTOPORPHYRIN IX CONTAINING FE

ChemComp-FMX:
FAMOXADONE

ChemComp-ASC:
ASCORBIC ACID / medication*YM

ChemComp-SR:
STRONTIUM ION

ChemComp-LOP:
(1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE / phospholipid*YM

ChemComp-HEC:
HEME C

ChemComp-BOG:
octyl beta-D-glucopyranoside / detergent*YM

ChemComp-FES:
FE2/S2 (INORGANIC) CLUSTER

ChemComp-HOH:
WATER

ChemComp-SMA:
STIGMATELLIN A

ChemComp-ANJ:
(2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE

ChemComp-6PE:
1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE

ChemComp-CDL:
CARDIOLIPIN / phospholipid*YM

ChemComp-GOL:
GLYCEROL

ChemComp-FNM:
(5S)-5-methyl-2-(methylsulfanyl)-5-phenyl-3-(phenylamino)-3,5-dihydro-4H-imidazol-4-one / inhibitor*YM

ChemComp-8PE:
(2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate / phospholipid*YM

ChemComp-CL:
Unknown entry

ChemComp-PEF:
DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE / phospholipid*YM

ChemComp-PX4:
1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE / DMPC, phospholipid*YM

Source
  • rhodobacter sphaeroides (bacteria)
  • bos taurus (domestic cattle)
KeywordsOXIDOREDUCTASE / Mitochondrial respiratory chain complex / cytochrome bc1 / inhibitors / electron transfer / mitochondrial respiratory chain / cytochrome bc1 complex / fenamidone

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