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Structure paper

TitleHow Pol a-primase is targeted to replisomes to prime eukaryotic DNA replication
Journal, issue, pagesMol. Cell, Year 2023
Publish dateJul 4, 2022 (structure data deposition date)
AuthorsJones ML / Aria V / Baris Y / Yeeles JTP
External linksMol. Cell / Search PubMed
MethodsEM (single particle)
Resolution2.98 - 8.75098 Å
Structure data

EMDB-15303: S. cerevisiae pol alpha bound to the core replisome engaged with a fork DNA substrate containing a 60 nucleotide lagging strand - unbinned.
Method: EM (single particle) / Resolution: 3.34 Å

EMDB-15304: Csm3/Tof1 local refinement - pol alpha bound replisome
Method: EM (single particle) / Resolution: 3.93 Å

EMDB-15305: C-tier local refinement, pol alpha - replisome complex. Locally filtered
Method: EM (single particle) / Resolution: 3.23 Å

EMDB-15306: Pol12, PolA1 and Pri2 N-terminal domain local refinement. Pol alpha - replisome complex.
Method: EM (single particle) / Resolution: 5.04 Å

EMDB-15309: Pol alpha - replisome complex containing Ctf4. Engaged on a DNA fork containing a 60 nucleotide lagging strand.
Method: EM (single particle) / Resolution: 4.64 Å

EMDB-15310: Ctf4 - GINS - Cdc45 local refinement. Pol alpha - replisome complex.
Method: EM (single particle) / Resolution: 3.33 Å

EMDB-15340: MCM C-tier local refinement. Human replisome bound by pol alpha, engaged on fork DNA with 60 nt lagging strand.
Method: EM (single particle) / Resolution: 3.7 Å

EMDB-15341: Human replisome bound by pol alpha, engaged on fork DNA containing a 60 nt lagging strand.
Method: EM (single particle) / Resolution: 3.4 Å

EMDB-15342: AND-1, CDC45, GINS local refinement. Human replisome bound by pol alpha - engaged on a 60 nt lagging strand DNA fork substrate.
Method: EM (single particle) / Resolution: 3.4 Å

EMDB-15349: Human replisome bound by Pol Alpha, locally filtered. Strong PRIM1 density. Engaged on a fork DNA substrate containing a 60 nt lagging strand.
Method: EM (single particle) / Resolution: 4.33 Å

EMDB-15351: Pol alpha local refinement. Human replisome bound by Pol Alpha, engaged on a fork DNA substrate containing a 60 nt lagging strand.
Method: EM (single particle) / Resolution: 4.3 Å

EMDB-15356: TIMELESS/TIPIN local refinement. Human replisome bound by Pol Alpha engaged on fork DNA with a 60 nt lagging strand.
Method: EM (single particle) / Resolution: 4.05 Å

EMDB-15902: S. cerevisiae replisome + Ctf4 + pol alpha. Unbinned, locally filtered.
Method: EM (single particle) / Resolution: 3.5 Å

EMDB-15904: Composite map - human replisome + Pol alpha
Method: EM (single particle) / Resolution: 4.0 Å

EMDB-15918: Human replisome + pol alpha. Not engaged on DNA.
Method: EM (single particle) / Resolution: 3.6 Å

EMDB-15922: Human replisome bound to pol alpha engaged on a DNA fork substrate containing a 15 nucleotide lagging strand.
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-15923: Human replisome prepared in the presence of a fork DNA substrate containing a 60 nucleotide lagging strand. Off DNA.
Method: EM (single particle) / Resolution: 3.6 Å

EMDB-16247: Local refinement, Pri1:Pri2-CTD. Pol alpha primase associated budding yeast replisome.
Method: EM (single particle) / Resolution: 8.75098 Å

EMDB-16248: Pol alpha primase associated budding yeast replisome. Consensus refinement containing clear density for the Pri2-CTD and Pol1 exo/cat domains.
Method: EM (single particle) / Resolution: 4.61857 Å

EMDB-16320: Pol-alpha primase associated replisome binned consensus refinement in the absence of Ctf4, 60 nucleotide 5'-flap DNA fork
Method: EM (single particle) / Resolution: 4.64 Å

EMDB-16322: Pol alpha-primase associated replisome unbinned consensus refinement in the absence of Ctf4, 60 nucleotide 5'-flap DNA fork
Method: EM (single particle) / Resolution: 3.47 Å

EMDB-16323: Un-binned consensus refinement of Pol alpha-primase associated with the replisome only via the Pri2:Mcm5ZnF interface, 60 nucleotide 5'-flap DNA fork
Method: EM (single particle) / Resolution: 2.98 Å

EMDB-16885: Pol12:Pol1CTD local refinement
Method: EM (single particle) / Resolution: 4.8 Å

Source
  • Saccharomyces cerevisiae (brewer's yeast)
  • Homo sapiens (human)

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