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Structure paper

TitleAtomic resolution structures of the methane-activating enzyme in anaerobic methanotrophy reveal extensive post-translational modifications.
Journal, issue, pagesNat Commun, Vol. 16, Page 8229-8229, Year 2025
Publish dateMar 21, 2025 (structure data deposition date)
AuthorsMuller, M.C. / Wissink, M. / Mukherjee, P. / Von Possel, N. / Laso-Perez, R. / Engilberge, S. / Carpentier, P. / Kahnt, J. / Wegener, G. / Welte, C.U. / Wagner, T.
External linksNat Commun / PubMed:40913044
MethodsX-ray diffraction
Resolution0.98 - 1.8 Å
Structure data

PDB-9qm5:
Krypton-pressurized Methyl-Coenzyme M reductase of an ANME-2c isolated from a microbial enrichment
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-9qqt:
Methyl-coenzyme M reductase of ANME-2d Candidatus Methanoperedens Vercelli Strain 1 from a bioreactor enrichment culture
Method: X-RAY DIFFRACTION / Resolution: 0.98 Å

PDB-9qr1:
Methyl-coenzyme M reductase of ANME-2d Candidatus Methanoperedens sp. BLZ2 from a bioreactor enrichment culture
Method: X-RAY DIFFRACTION / Resolution: 0.98 Å

PDB-9qr3:
Methyl-coenzyme M reductase of an ANME-2c from a microbial enrichment
Method: X-RAY DIFFRACTION / Resolution: 1.34 Å

Chemicals

ChemComp-KR:
KRYPTON

ChemComp-MG:
Unknown entry

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-CL:
Unknown entry

ChemComp-TP7:
Coenzyme B

ChemComp-F43:
FACTOR 430

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-GOL:
GLYCEROL

ChemComp-COM:
1-THIOETHANESULFONIC ACID

ChemComp-NA:
Unknown entry

ChemComp-K:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-SHT:
O-PHOSPHONO-N-{(2E)-7-[(2-SULFOETHYL)DITHIO]HEPT-2-ENOYL}-L-THREONINE

ChemComp-NO3:
NITRATE ION

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

Source
  • candidatus methanogasteraceae archaeon (archaea)
  • candidatus methanoperedens sp. (archaea)
  • candidatus methanoperedens sp. blz2 (archaea)
KeywordsTRANSFERASE / methanotrophy / anaerobic methanotrophic archaea / methane oxidation / methyl-coenzyme M reductase / MCR / ANME / reverse methanogenesis / nickel-dependent enzyme / coenzyme M / coenzyme B / F430 cofactor / krypton / post-translational modification

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