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Structure paper

TitlePRPS2 enhances RNA m 6 A methylation by stimulating SAM synthesis through enzyme-dependent and independent mechanisms.
Journal, issue, pagesNat Commun, Vol. 16, Page 3966-3966, Year 2025
Publish dateMar 18, 2024 (structure data deposition date)
AuthorsZhang, L. / Zhao, X. / Hu, J. / Li, T. / Chen, H.Z. / Zhang, A. / Wang, H. / Yu, J.
External linksNat Commun / PubMed:40295500
MethodsX-ray diffraction
Resolution2.74 - 3.1 Å
Structure data

PDB-8ypy:
Crystal strcuture of human phosphoribosyl pyrophosphate synthetase2 (PRPS2) in complex with ligands
Method: X-RAY DIFFRACTION / Resolution: 2.74 Å

PDB-8ypz:
Crystal strcture of human phosphoribosyl pyrophosphate synthetase 1 (PRPS1) in complex with GDP
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-8yq0:
Crystal structure of human phosphoribosyl pyrophosphate synthetase 1(PRPS1) chimera swapped with three residues from PRPS2
Method: X-RAY DIFFRACTION / Resolution: 3.1 Å

Chemicals

ChemComp-APC:
DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER / AMP-CPP, energy-carrying molecule analogue*YM

ChemComp-HSX:
5-O-phosphono-alpha-D-ribofuranose

ChemComp-CD:
Unknown entry

ChemComp-PO4:
PHOSPHATE ION

ChemComp-HOH:
WATER

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM

Source
  • homo sapiens (human)
KeywordsBIOSYNTHETIC PROTEIN / purine biosynthesis

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