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Structure paper

TitleStructure-guided design of C3-branched swainsonine as potent and selective human Golgi alpha-mannosidase (GMII) inhibitor.
Journal, issue, pagesChem. Commun. (Camb. ), Vol. 60, Page 11734-11737, Year 2024
Publish dateJun 25, 2024 (structure data deposition date)
AuthorsKoemans, T. / Bennett, M. / Ferraz, M.J. / Armstrong, Z. / Artola, M. / Aerts, J.M.F.G. / Codee, J.D.C. / Overkleeft, H.S. / Davies, G.J.
External linksChem. Commun. (Camb. ) / PubMed:39318342
MethodsX-ray diffraction
Resolution2.14 - 2.47 Å
Structure data

PDB-9ftq:
Drosophila golgi alpha-mannosidase II (dGMII) in complex with swainsonine-configured alkyl indolizidine
Method: X-RAY DIFFRACTION / Resolution: 2.47 Å

PDB-9ftr:
Drosophila golgi alpha-mannosidase II (dGMII) in complex with amide modified swainsonine-configured alkyl indolizidine
Method: X-RAY DIFFRACTION / Resolution: 2.14 Å

Chemicals

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

PDB-1igc:
IGG1 FAB FRAGMENT (MOPC21) COMPLEX WITH DOMAIN III OF PROTEIN G FROM STREPTOCOCCUS

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

PDB-1igb:
AEROMONAS PROTEOLYTICA AMINOPEPTIDASE COMPLEXED WITH THE INHIBITOR PARA-IODO-D-PHENYLALANINE HYDROXAMATE

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • drosophila melanogaster (fruit fly)
KeywordsHYDROLASE / Inhibitor / glycosyl hydrolase

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