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Structure paper

TitleBdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Journal, issue, pagesNat Microbiol, Vol. 9, Page 214-227, Year 2024
Publish dateMar 24, 2023 (structure data deposition date)
AuthorsCaulton, S.G. / Lambert, C. / Tyson, J. / Radford, P. / Al-Bayati, A. / Greenwood, S. / Banks, E.J. / Clark, C. / Till, R. / Pires, E. ...Caulton, S.G. / Lambert, C. / Tyson, J. / Radford, P. / Al-Bayati, A. / Greenwood, S. / Banks, E.J. / Clark, C. / Till, R. / Pires, E. / Sockett, R.E. / Lovering, A.L.
External linksNat Microbiol / PubMed:38177296
MethodsX-ray diffraction
Resolution1.12 - 2.56 Å
Structure data

PDB-8ojn:
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Method: X-RAY DIFFRACTION / Resolution: 2.51 Å

PDB-8ok3:
Structure of the C-terminal domain of the Bdellovibrio bacteriovorus Bd2133 fibre
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-8oks:
Crystal structure of Bdellovibrio bacteriovorus Bd2740 C-terminal domain
Method: X-RAY DIFFRACTION / Resolution: 2.09 Å

PDB-8okw:
Crystal structure of Bdellovibrio bacteriovorus Bd2734 C-terminal domain
Method: X-RAY DIFFRACTION / Resolution: 1.84 Å

PDB-8ol4:
Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd2439 fibre in complex with GlcNAc
Method: X-RAY DIFFRACTION / Resolution: 1.84 Å

PDB-8oml:
Crystal structure of Bdellovibrio bacteriovorus Bd1334 C-terminal domains
Method: X-RAY DIFFRACTION / Resolution: 2.56 Å

PDB-8on4:
Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd1334 fibre
Method: X-RAY DIFFRACTION / Resolution: 1.41 Å

PDB-8onb:
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Method: X-RAY DIFFRACTION / Resolution: 1.12 Å

PDB-8onc:
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-8ond:
Structure of the C-terminal domains of the Bdellovibrio bacteriovorus Bd2133 fibre
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-8onf:
Crystal structure of Bdellovibrio bacteriovorus Bd2439 fibre C-terminal domains with ethylene glycol
Method: X-RAY DIFFRACTION / Resolution: 1.53 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-NA:
Unknown entry

ChemComp-CL:
Unknown entry

ChemComp-IOD:
IODIDE ION

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-B3P:
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-PO4:
PHOSPHATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • bdellovibrio bacteriovorus hd100 (bacteria)
KeywordsCELL ADHESION / Fibre / adhesin / C-type lectin / TNF / TNF-like

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