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Structure paper

TitleBacteroidota polysaccharide utilization system for branched dextran exopolysaccharides from lactic acid bacteria.
Journal, issue, pagesJ. Biol. Chem., Vol. 299, Page 104885-104885, Year 2023
Publish dateMar 24, 2023 (structure data deposition date)
AuthorsNakamura, S. / Kurata, R. / Tonozuka, T. / Funane, K. / Park, E.Y. / Miyazaki, T.
External linksJ. Biol. Chem. / PubMed:37269952
MethodsX-ray diffraction
Resolution1.18 - 1.85 Å
Structure data

PDB-8iu8:
Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-8iu9:
Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae in complex with glucose
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-8iua:
Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae in complex with isomaltose
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-8iub:
Crystal structure of GH66 endodextranase from Flavobacterium johnsoniae in complex with isomaltotriose
Method: X-RAY DIFFRACTION / Resolution: 1.18 Å

PDB-8iuc:
Crystal structure of GH65 alpha-1,2-glucosidase from Flavobacterium johnsoniae in complex with isomaltose
Method: X-RAY DIFFRACTION / Resolution: 1.56 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-GLC:
alpha-D-glucopyranose

ChemComp-BGC:
beta-D-glucopyranose

ChemComp-NA:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • flavobacterium johnsoniae uw101 (bacteria)
KeywordsHYDROLASE / glycoside hydrolase / GH66 / dextran / TIM-barrel / GH65 / kojibiose / (alpha/alpha)6-barrel

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