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Structure paper

TitleCrystal structures of Mycobacterial MeaB and MMAA-like GTPases.
Journal, issue, pagesJ. Struct. Funct. Genom., Vol. 16, Page 91-99, Year 2015
Publish dateMar 29, 2010 (structure data deposition date)
AuthorsEdwards, T.E. / Baugh, L. / Bullen, J. / Baydo, R.O. / Witte, P. / Thompkins, K. / Phan, I.Q. / Abendroth, J. / Clifton, M.C. / Sankaran, B. ...Edwards, T.E. / Baugh, L. / Bullen, J. / Baydo, R.O. / Witte, P. / Thompkins, K. / Phan, I.Q. / Abendroth, J. / Clifton, M.C. / Sankaran, B. / Van Voorhis, W.C. / Myler, P.J. / Staker, B.L. / Grundner, C. / Lorimer, D.D.
External linksJ. Struct. Funct. Genom. / PubMed:25832174
MethodsX-ray diffraction
Resolution1.9 - 2.45 Å
Structure data

PDB-3md0:
Crystal structure of arginine/ornithine transport system ATPase from Mycobacterium tuberculosis bound to GDP (a RAS-like GTPase superfamily protein)
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-3nxs:
Crystal structure of LAO/AO transport system from Mycobacterium smegmatis bound to GDP
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-3p32:
Hydrolysis of GTP to GDP by an MCM-associated and MeaB- and MMAA-like G-protein from Mycobacterium tuberculosis
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-3tk1:
Crystal structure of a MeaB and Rv1496 ortholog from Mycobacterium thermoresistible bound to GDP
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-4gt1:
Crystal structure of a MeaB- and MMAA-like GTPase from Mycobacterium tuberculosis bound to 2'-deoxyguanosine diphosphate
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

Chemicals

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM / Guanosine diphosphate

ChemComp-UNX:
Unknown entry

ChemComp-HOH:
WATER / Water

ChemComp-CL:
Unknown entry / Chloride

ChemComp-PGE:
TRIETHYLENE GLYCOL / Polyethylene glycol

ChemComp-DGI:
2'-DEOXYGUANOSINE-5'-DIPHOSPHATE / Deoxyguanosine diphosphate

Source
  • mycobacterium tuberculosis (bacteria)
  • mycobacterium smegmatis (bacteria)
  • mycobacterium thermoresistibile (bacteria)
KeywordsTRANSPORT PROTEIN / Seattle Structural Genomics Center for Infectious Disease / RAS / RAS-like GTPase / allosteric modulator / tuberculosis / ATP-binding / Nucleotide-binding / SSGCID / Mycobacterium / pathogenic bacterium / methylmalonic aciduria / ortholog / RAS-like GTPase superfamily / G-domain / arginine / ornithine / transport system / GTPAse / mislabeled as an ATPase / metallochaperone / HYDROLASE / Structural Genomics / MeaB / MMAA / methylmalonic aciduria protein a / G-protein / MCM / methylmalonyl-CoA mutase / incorrectly assigned as an arginine/ornithine transport system ATPase / methylmaolonyl pathway / Rv1496 / thermophile / GDP / NIAID / National Institute of Allergy and Infectious Diseases / ATPase / substrate-specificity / ArgK superfamily / chain swapped homodimer

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