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Structure paper

TitleExtracellular Architecture of the SYG-1/SYG-2 Adhesion Complex Instructs Synaptogenesis.
Journal, issue, pagesCell(Cambridge,Mass. ), Vol. 156, Page 482-494, Year 2014
Publish dateJan 14, 2014 (structure data deposition date)
AuthorsOzkan, E. / Chia, P.H. / Wang, R.R. / Goriatcheva, N. / Borek, D. / Otwinowski, Z. / Walz, T. / Shen, K. / Garcia, K.C.
External linksCell(Cambridge,Mass. ) / PubMed:24485456
MethodsX-ray diffraction
Resolution1.696 - 3.94 Å
Structure data

PDB-4of0:
Crystal Structure of SYG-1 D1-D2, refolded
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4of3:
Crystal Structure of SYG-1 D1-D2, Glycosylated
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-4of6:
Crystal Structure of SYG-1 D1, Crystal form 1
Method: X-RAY DIFFRACTION / Resolution: 1.696 Å

PDB-4of7:
Crystal Structure of SYG-1 D1, Crystal Form 2
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4of8:
Crystal Structure of Rst D1-D2
Method: X-RAY DIFFRACTION / Resolution: 1.902 Å

PDB-4ofd:
Crystal Structure of mouse Neph1 D1-D2
Method: X-RAY DIFFRACTION / Resolution: 3.94 Å

PDB-4ofi:
Crystal Structure of Duf (Kirre) D1
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4ofk:
Crystal Structure of SYG-2 D4
Method: X-RAY DIFFRACTION / Resolution: 1.802 Å

PDB-4ofp:
Crystal Structure of SYG-2 D3-D4
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-4ofy:
Crystal Structure of the Complex of SYG-1 D1-D2 and SYG-2 D1-D4
Method: X-RAY DIFFRACTION / Resolution: 3.3 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-SO4:
SULFATE ION

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-NA:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-CL:
Unknown entry

ChemComp-EMC:
ETHYL MERCURY ION

Source
  • caenorhabditis elegans (invertebrata)
  • drosophila melanogaster (fruit fly)
  • mus musculus (house mouse)
KeywordsCELL ADHESION / Immunoglobulin superfamily / Synaptogenesis / Protein Binding / Membrane / Extracellular / SIGNALING PROTEIN / N-linked Glycosylation / myoblast fusion / eye development / Kidney / Blood filtration / nephrocyte filtration

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