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Structure paper

TitleStructure of PAS-linked histidine kinase and the response regulator complex
Journal, issue, pagesStructure, Vol. 17, Page 1333-1344, Year 2009
Publish dateMar 24, 2009 (structure data deposition date)
AuthorsYamada, S. / Sugimoto, H. / Kobayashi, M. / Ohno, A. / Nakamura, H. / Shiro, Y.
External linksStructure / PubMed:19836334
MethodsX-ray diffraction
Resolution1.47 - 3.8 Å
Structure data

PDB-3a0r:
Crystal structure of histidine kinase ThkA (TM1359) in complex with response regulator protein TrrA (TM1360)
Method: X-RAY DIFFRACTION / Resolution: 3.8 Å

PDB-3a0s:
PAS domain of histidine kinase ThkA (TM1359)
Method: X-RAY DIFFRACTION / Resolution: 1.47 Å

PDB-3a0t:
Catalytic domain of histidine kinase ThkA (TM1359) in complex with ADP and Mg ion (trigonal)
Method: X-RAY DIFFRACTION / Resolution: 1.91 Å

PDB-3a0u:
Crystal structure of response regulator protein TrrA (TM1360) from Thermotoga maritima in complex with Mg(2+)-BeF (wild type)
Method: X-RAY DIFFRACTION / Resolution: 1.66 Å

PDB-3a0v:
PAS domain of histidine kinase ThkA (TM1359) (SeMet, F486M/F489M)
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-3a0w:
Catalytic domain of histidine kinase ThkA (TM1359) for MAD phasing (nucleotide free form 2, orthorombic)
Method: X-RAY DIFFRACTION / Resolution: 1.69 Å

PDB-3a0x:
Catalytic domain of histidine kinase ThkA (TM1359) (nucleotide free form 1: ammomium phosphate, monoclinic)
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-3a0y:
Catalytic domain of histidine kinase ThkA (TM1359) (nucleotide free form 3: 1,2-propanediol, orthorombic)
Method: X-RAY DIFFRACTION / Resolution: 1.57 Å

PDB-3a0z:
Catalytic domain of histidine kinase ThkA (TM1359) (nucleotide free form 4: isopropanol, orthorombic)
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-3a10:
Crystal structure of response regulator protein TrrA (TM1360) from Thermotoga maritima in complex with Mg(2+)-BeF (SeMet, L89M)
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

Chemicals

ChemComp-HG:
Unknown entry

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-HOH:
WATER

ChemComp-MG:
Unknown entry

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-BEF:
BERYLLIUM TRIFLUORIDE ION

ChemComp-EOH:
ETHANOL

ChemComp-EMC:
ETHYL MERCURY ION

ChemComp-EMT:
2-(ETHYLMERCURI-THIO)-BENZOIC ACID

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

Source
  • thermotoga maritima (bacteria)
KeywordsTRANSFERASE / four helix bundle / PAS fold / Kinase / Phosphoprotein / Two-component regulatory system / PAS-fold / ATP-lid / SIGNALING PROTEIN / phosphoacceptor

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