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Structure paper

TitleStructural basis for nicotinamide inhibition and base exchange in sir2 enzymes.
Journal, issue, pagesMol. Cell, Vol. 25, Page 463-472, Year 2007
Publish dateDec 21, 2006 (structure data deposition date)
AuthorsSanders, B.D. / Zhao, K. / Slama, J.T. / Marmorstein, R.
External linksMol. Cell / PubMed:17289592
MethodsX-ray diffraction
Resolution2 - 2.05 Å
Structure data

PDB-2od2:
Crystal Structure of yHst2 I117F mutant bound to carba-NAD+ and an acetylated H4 peptide
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-2od7:
Crystal Structure of yHst2 bound to the intermediate analogue ADP-HPD, and and aceylated H4 peptide
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-2od9:
Structural Basis for Nicotinamide Inhibition and Base Exchange in Sir2 Enzymes
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-2qqf:
Hst2 bound to ADP-HPD and Acetylated histone H4
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-2qqg:
Hst2 bound to ADP-HPD, acetyllated histone H4 and nicotinamide
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-CNA:
CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-A1R:
5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE

ChemComp-NCA:
NICOTINAMIDE / medication*YM

Source
  • saccharomyces cerevisiae (brewer's yeast)
KeywordsHYDROLASE / Zn binding protein / Rossmann fold / Zn binding domain / Sir2 / Hst2 / histone deacetylase / SN1 / Metal-binding / NAD / Nucleus / Repressor / Transcription / Transcription regulation / Zinc

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