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Structure paper

TitleStructural basis for coupling protein transport and N-glycosylation at the mammalian endoplasmic reticulum.
Journal, issue, pagesScience, Vol. 360, Issue 6385, Page 215-219, Year 2018
Publish dateApr 13, 2018
AuthorsKatharina Braunger / Stefan Pfeffer / Shiteshu Shrimal / Reid Gilmore / Otto Berninghausen / Elisabet C Mandon / Thomas Becker / Friedrich Förster / Roland Beckmann /
PubMed AbstractProtein synthesis, transport, and N-glycosylation are coupled at the mammalian endoplasmic reticulum by complex formation of a ribosome, the Sec61 protein-conducting channel, and ...Protein synthesis, transport, and N-glycosylation are coupled at the mammalian endoplasmic reticulum by complex formation of a ribosome, the Sec61 protein-conducting channel, and oligosaccharyltransferase (OST). Here we used different cryo-electron microscopy approaches to determine structures of native and solubilized ribosome-Sec61-OST complexes. A molecular model for the catalytic OST subunit STT3A (staurosporine and temperature sensitive 3A) revealed how it is integrated into the OST and how STT3-paralog specificity for translocon-associated OST is achieved. The OST subunit DC2 was placed at the interface between Sec61 and STT3A, where it acts as a versatile module for recruitment of STT3A-containing OST to the ribosome-Sec61 complex. This detailed structural view on the molecular architecture of the cotranslational machinery for N-glycosylation provides the basis for a mechanistic understanding of glycoprotein biogenesis at the endoplasmic reticulum.
External linksScience / PubMed:29519914 / PubMed Central
MethodsEM (subtomogram averaging) / EM (single particle)
Resolution4.2 - 30.0 Å
Structure data

EMDB-4306:
Subtomogram average of unsorted ribosome-translocon complexes from STT3B(-/-) HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4307:
Subtomogram average of OST-free ribosome-translocon complexes from STT3B(-/-) HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4308:
Subtomogram average of OST-containing ribosome-translocon complexes from STT3B(-/-) HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4309:
Subtomogram average of unsorted ribosome-translocon complexes from STT3A(-/-) HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4310:
Subtomogram average of OST-free ribosome-translocon complexes from STT3A(-/-) HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4311:
Subtomogram average of ribosome-translocon complexes from STT3A(-/-) HEK cells containing an unidentified ER-lumenal component
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4312:
Subtomogram average of unsorted ribosome-translocon complexes from wild type HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4313:
Subtomogram average of OST-free ribosome-translocon complexes from wild type HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4314:
Subtomogram average of OST-containing ribosome-translocon complexes from wild type HEK cells
Method: EM (subtomogram averaging) / Resolution: 30.0 Å

EMDB-4315, PDB-6ftg:
Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
Method: EM (subtomogram averaging) / Resolution: 9.1 Å

EMDB-4316, PDB-6fti:
Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome
Method: EM (single particle) / Resolution: 4.2 Å

EMDB-4317, PDB-6ftj:
Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Non-programmed 80S Ribosome
Method: EM (single particle) / Resolution: 4.7 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-ZN:
Unknown entry

ChemComp-9UB:
[(2~{S},3~{R},4~{R},5~{S},6~{R})-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]methyl-[oxidanyl-[(2~{Z},6~{Z},10~{Z})-3,7,11,15-tetramethylhexadeca-2,6,10,14-tetraenoxy]phosphoryl]oxy-phosphinic acid

Source
  • Homo sapiens (human)
  • canis lupus familiaris (dog)
  • oryctolagus cuniculus (rabbit)
  • Rabbit (rabbit)
  • Dog (dog)
KeywordsPROTEIN TRANSPORT / Protein translocon of the endoplasmic reticulum

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