[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,275 items for (author: zhang & b)

EMDB-75470:
Hna Monomer
Method: single particle / : Hooper M

PDB-10uj:
Hna Monomer
Method: single particle / : Hooper M

EMDB-69219:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-69220:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sp:
TamA complex with TamB DUF490 in lipid nanodisc
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

PDB-23sq:
TamA complex with TamB DUF490 in detergent micelles.
Method: single particle / : Adamson LSR, Doyle MT, Grosas AB

EMDB-71823:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

PDB-9ps5:
Cryo-EM structure of NCLX without calcium (class 2)
Method: single particle / : Zhang J, Feng L

EMDB-71685:
Cryo-EM structure of human NXPE1
Method: single particle / : Zhang H, Li F, Piper D, Min X

EMDB-68620:
Human KCNQ3-CaM in apo state
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

PDB-22rj:
Human KCNQ3-CaM in apo state
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

EMDB-66501:
glycoprotein of mengla virus with MR191 Fab bound
Method: single particle / : Wang L, Zou B, Liu B, Xue L, He J, Xiong X, Xiaoli X

EMDB-66502:
apo state of Mengla Virus Glycoprotein
Method: single particle / : Wang L, Zou B, Liu B, Xue L, He J, Xiong X, Xiaoli X

EMDB-75039:
Human AGO2 bound to a miR-20a guide and a position 10-11 mismatched target
Method: single particle / : Savidge A, Nakanishi K

EMDB-68626:
Human KCNQ3-XEN1101 complex in the presence of PIP2
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

PDB-22rq:
Human KCNQ3-XEN1101 complex in the presence of PIP2
Method: single particle / : Cheng XY, Wan SY, Jiang DX, Zhang HY, Hu B, Hou PP, Zhang J

EMDB-70934:
Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA in 10 mM Ca2+
Method: single particle / : Lee YT, Stagno JR, Wang YX

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-74628:
Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA111.
Method: single particle / : Nam YW, Ramanishka A, Zhang M

PDB-9zrr:
Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA111.
Method: single particle / : Nam YW, Ramanishka A, Zhang M

EMDB-71616:
Architecture of human Voltage Dependent Anion Channel 1 in nanodiscs
Method: single particle / : Modaresi SM, Degen M, Hiller S

PDB-9pfz:
Architecture of human Voltage Dependent Anion Channel 1 in nanodiscs
Method: single particle / : Modaresi SM, Degen M, Hiller S

EMDB-65364:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65365:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65366:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65367:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65368:
Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vui:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vuj:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vuk:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vul:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vum:
Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-64522:
Single-subunit Escherichia coli nicotinamide nucleotide transhydrogenase in the presence of palmitoyl-CoA
Method: single particle / : Zhu J, Gennis RB, Zhang K, Li J

PDB-9uv3:
Single-subunit Escherichia coli nicotinamide nucleotide transhydrogenase in the presence of palmitoyl-CoA
Method: single particle / : Zhu J, Gennis RB, Zhang K, Li J

EMDB-71871:
Cryo-EM structure of MOR-Gi1 complex protein bound with DAMGO
Method: single particle / : Zhang H, Wacker D, Zilberg G, Warren AL, Parpounas AK, Abraham A

PDB-10tm:
Cryo-EM structure of MOR bound with DAMGO
Method: single particle / : Zhang H, Wacker D, Zilberg G, Warren AL, Parpounas AK, Abraham A

PDB-9pud:
Cryo-EM structure of MOR-Gi1 complex protein bound with DAMGO
Method: single particle / : Zhang H, Wacker D, Zilberg G, Warren AL, Parpounas AK, Abraham A

EMDB-64531:
Escherichia coli nicotinamide nucleotide transhydrogenase single dIII attached to dII state in the presence of NADPH
Method: single particle / : Zhu J, Gennis RB, Zhang K, Li J

EMDB-64530:
Escherichia coli transhydrogenase the dissociated (dI)2 dimer in the presence of both NADPH and NADP+
Method: single particle / : Zhu J, Gennis RB, Zhang K, Li J

PDB-9uvb:
Escherichia coli transhydrogenase the dissociated (dI)2 dimer in the presence of both NADPH and NADP+
Method: single particle / : Zhu J, Gennis RB, Zhang K, Li J

EMDB-47893:
Cryo-EM map of 2 VRC36 Fabs bound to HIV-1 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Zhang B, Du H, Rubin S, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-47895:
Cryo-EM map of 4 VRC36 Fabs bound to HIV-1 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Zhang B, Du H, Rubin S, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-71869:
Cryo-EM structure of human MOR-Gi1 complex protein bound with DAMGO and BMS986187
Method: single particle / : Zhang H, Zilberg G, Parpounas A, Warren AL, Wacker D, Abraham A

PDB-10tl:
Cryo-EM structure of human MOR bound with DAMGO and BMS986187
Method: single particle / : Zhang H, Zilberg G, Parpounas A, Warren AL, Wacker D, Abraham A

PDB-9pu5:
Cryo-EM structure of human MOR-Gi1 complex protein bound with DAMGO and BMS986187
Method: single particle / : Zhang H, Zilberg G, Parpounas A, Warren AL, Wacker D, Abraham A

EMDB-70607:
Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

PDB-9om5:
Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-75818:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 1E11
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Kwong PD, Zhou T

PDB-11lt:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 1E11
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Kwong PD, Zhou T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more