[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 21,711 items for (author: yu & c)

EMDB-67027:
Cryo-EM structure of Integrin alpha V beta 6 complex with a bicyclic inhibitory peptide
Method: single particle / : Wang JC, An YN

PDB-9xmm:
Cryo-EM structure of Integrin alpha V beta 6 complex with a bicyclic inhibitory peptide
Method: single particle / : Wang JC, An YN

EMDB-64797:
Cryo-EM structure of free-state VbAgo
Method: single particle / : Wu S

EMDB-64798:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA
Method: single particle / : Wu S

EMDB-64822:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA
Method: single particle / : Shan W

EMDB-64826:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA in target-released state
Method: single particle / : Wu S

EMDB-64832:
Structure of the Argonaute protein from Verrucomicrobiota bacterium in complex with guide DNA and target RNA in dimeric state.
Method: single particle / : Wu S

EMDB-64859:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA in monomeric state.
Method: single particle / : Wu S

EMDB-64871:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA in monomeric state.
Method: single particle / : Wu S

EMDB-64873:
The transition-state structure of the Argonaute protein from a Verrucomicrobia bacterium in complex with guide DNA and target RNA.
Method: single particle / : Wu S

PDB-9v65:
Cryo-EM structure of free-state VbAgo
Method: single particle / : Wu S

PDB-9v66:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA
Method: single particle / : Wu S

PDB-9v7s:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA
Method: single particle / : Shan W

PDB-9v7z:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA in target-released state
Method: single particle / : Wu S

PDB-9v8a:
Structure of the Argonaute protein from Verrucomicrobiota bacterium in complex with guide DNA and target RNA in dimeric state.
Method: single particle / : Wu S

PDB-9v93:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA in monomeric state.
Method: single particle / : Wu S

PDB-9v9g:
Structure of the Argonaute protein from Verrucomicrobia bacterium in complex with guide DNA and target RNA in monomeric state.
Method: single particle / : Wu S

PDB-9v9i:
The transition-state structure of the Argonaute protein from a Verrucomicrobia bacterium in complex with guide DNA and target RNA.
Method: single particle / : Wu S

EMDB-61961:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 0U scaffold at 2.96 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61962:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 1U sacffold at 3.5 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61963:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 2U sacffold at 3.04 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61964:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 3U sacffold at 3.8 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61965:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 4U sacffold at 3.32 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61966:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 5U sacffold at 3.19 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61967:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 6U sacffold at 3.04 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61968:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 7U sacffold at 3.42 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-61969:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 8U sacffold at 4.06 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k11:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 0U scaffold at 2.96 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k12:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 1U sacffold at 3.5 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k13:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 2U sacffold at 3.04 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k14:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 3U sacffold at 3.8 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k15:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 4U sacffold at 3.32 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k16:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 5U sacffold at 3.19 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k17:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 6U sacffold at 3.04 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k18:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 7U sacffold at 3.42 Angstrom
Method: single particle / : Xie G, Du X, Du J

PDB-9k19:
A cryo-EM structure of B. oleracea RNA polymerase V in complex with 8U sacffold at 4.06 Angstrom
Method: single particle / : Xie G, Du X, Du J

EMDB-73509:
Structure of the Plasmodium falciparum 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

EMDB-73510:
Structure of the human 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

PDB-9yuy:
Structure of the Plasmodium falciparum 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

PDB-9yuz:
Structure of the human 20S proteasome in complex with a beta5-selective covalent syringolin analogue inhibitor.
Method: single particle / : Yan NL, Gu X, Fajtova P, Tse E, Melo A, Southworth DR, O'Donoghue A, Sello JK, Gestwicki JE

EMDB-66514:
NPFF bound Mas1 Receptor
Method: single particle / : Zhang YM, Liu H, Xu HE

EMDB-66515:
NPFF bound Mas1 Receptor Complex
Method: single particle / : Zhang YM, Liu H, Xu HE

PDB-9x3y:
NPFF bound Mas1 Receptor
Method: single particle / : Zhang YM, Liu H, Xu HE

PDB-9x3z:
NPFF bound Mas1 Receptor Complex
Method: single particle / : Zhang YM, Liu H, Xu HE

EMDB-65007:
Structural basis for the assembly and translocation of the Vip1-Vip2 insecticidal binary toxin from Bacillus thuringiensis
Method: single particle / : Chen P, Zhao T

EMDB-65009:
Structural basis for the assembly and translocation of the Vip1-Vip2 insecticidal binary toxin from Bacillus thuringiensis
Method: single particle / : Chen P, Zhao T

EMDB-65010:
Structural basis for the assembly and translocation of the Vip1-Vip2 insecticidal binary toxin from Bacillus thuringiensis
Method: single particle / : Chen P, Zhao T

PDB-9veg:
Structural basis for the assembly and translocation of the Vip1-Vip2 insecticidal binary toxin from Bacillus thuringiensis
Method: single particle / : Chen P, Zhao T

PDB-9vej:
Structural basis for the assembly and translocation of the Vip1-Vip2 insecticidal binary toxin from Bacillus thuringiensis
Method: single particle / : Chen P, Zhao T

PDB-9vek:
Structural basis for the assembly and translocation of the Vip1-Vip2 insecticidal binary toxin from Bacillus thuringiensis
Method: single particle / : Chen P, Zhao T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more