[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 23,348 items for (author: yu & c)

EMDB-76463:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76464:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76465:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iy:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iz:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12ja:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-57240:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

PDB-29km:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

EMDB-72526:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

PDB-9y61:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

EMDB-66282:
transient receptor potential V family member 3
Method: single particle / : Chen JH, Yu J

EMDB-66283:
transient receptor potential V family member 3
Method: single particle / : Chen JH, Yu J

EMDB-66284:
transient receptor potential V family member 3
Method: single particle / : Chen JH, Yu J

PDB-9wv5:
transient receptor potential V family member 3
Method: single particle / : Chen JH, Yu J

PDB-9wv6:
transient receptor potential V family member 3
Method: single particle / : Chen JH, Yu J

PDB-9wv7:
transient receptor potential V family member 3
Method: single particle / : Chen JH, Yu J

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymj:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymk:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

PDB-9yml:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72520:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72521:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72522:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-72523:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5r:
Eukaryotic translation initiation factor 2-B (eIF2B) bound to phosphorylated eIF2alpha (NTD)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5s:
eIF2B lacking the latch helix bound to ISRACT-01 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5t:
eIF2B lacking the latch helix bound to ISRACT-02 (Active state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

PDB-9y5u:
eIF2B lacking the latch helix bound to ISRACT-02 (Inactive state)
Method: single particle / : Dalwadi U, Croll T, Subramanian A, Lee DJ, Arthur C, Walter P, Frost A

EMDB-80106:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y

PDB-25ho:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y

EMDB-55568:
Structure of a stalled E. coli 70S RNC-NuoK-86 in complex with SecYEG (Consensus Refinement)
Method: single particle / : Rosales-Hernandez C, Busch M, Kamel M, Kedrov A, Beckmann R

EMDB-55570:
Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with SecYEG-YidC (Consensus Refinement)
Method: single particle / : Rosales-Hernandez C, Busch M, Kamel M, Kedrov A, Beckmann R

EMDB-55571:
Structure of a stalled E. coli 70S RNC-NuoK-70 in complex with SecYEG-YidC (Focused Refinement)
Method: single particle / : Rosales-Hernandez C, Busch M, Kamel M, Kedrov A, Beckmann R

EMDB-66723:
Cryo-EM structure of BMS-986187-bound MOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66725:
BMS-986187-bound MOR-Gi1 G Protein EM map
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66726:
The overall map of BMS-986187-bound MOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66730:
The receptor local map of BMS-986187-bound MOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66771:
Cryo-EM structure of BMS986187 bound DOR-Gi complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

EMDB-66773:
Cryo-EM structure of asimadoline-BMS-986187-bound KOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66801:
Cryo-EM structure of Leu-enkephalin-BMS-986187-bound DOR-Gi2 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

EMDB-66825:
The receptor local map of BMS-986187-bound DOR-Gi2 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

EMDB-66826:
The G PROTEIN map of BMS-986187-bound DOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

EMDB-66827:
The overall map of BMS-986187-bound DOR-Gi2 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

EMDB-66828:
The receptor local map of asimadoline-BMS-986187-bound KOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66829:
The G PROTEIN map of asimadoline-BMS-986187-bound KOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66830:
The overall map of asimadoline-BMS-986187-bound KOR-Gi1 complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Shao ZH

EMDB-66831:
The receptor local map of Leu-enkephalin-BMS-986187-bound DOR-Gi complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

EMDB-66832:
The Gi protein local map of Leu-enkephalin-BMS-986187-bound DOR-Gi complex
Method: single particle / : Zhao C, Fu H, Tian XW, Cheng L, Yan W, Shao ZH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more