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Showing all 19 items for (author: umehara & t)

EMDB-34588:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34589:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34590:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (3.9 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Sato S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34591:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34592:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34593:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 3
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Sato S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34594:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34595:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34596:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-34597:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8hag:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (3.2 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8hah:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (3.9 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8hai:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 1 (4.7 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8haj:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 2 (4.8 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8hak:
Cryo-EM structure of the p300 catalytic core bound to the H4K12acK16ac nucleosome, class 4 (4.5 angstrom resolution)
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8hal:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 1
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8ham:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 2
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

PDB-8han:
Cryo-EM structure of the CBP catalytic core bound to the H4K12acK16ac nucleosome, class 3
Method: single particle / : Kikuchi M, Morita S, Wakamori M, Shin S, Uchikubo-Kamo T, Shirouzu M, Umehara T

EMDB-32094:
Cryo-EM structure of H2A-ubiquitinated nucleosome
Method: single particle / : Ohtomo H, Ito S, McKenzie NJ, Uckelmann M, Wakamori M, Ehara H, Tsunaka Y, Shibata M, Sekine S, Umehara T, Davidovich C, Koseki H, Nishimura Y

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About EMN search

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

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Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMN Search / EMN Statistics

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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