[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 556 items for (author: su & gc)

EMDB-74113:
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-74114:
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-72178:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER, Lander GC

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue6:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue7:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-51903:
Late-stage 48S Initiation Complex (LS48S IC) guided by the trans-RNA
Method: single particle / : Nguyen TT, Hashem Y, Rocha REO, Boissier F, Qian SB, Jia L, Uematsu S, Gu Y, Shi S

EMDB-51911:
Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
Method: single particle / : Nguyen TT, Hashem Y, Rocha REO, Boissier F, Qian SB, Jia L, Uematsu S, Gu Y, Shi S

PDB-9h6y:
Late-stage 48S Initiation Complex (LS48S IC) guided by the trans-RNA
Method: single particle / : Nguyen TT, Hashem Y, Rocha REO, Boissier F, Qian SB, Jia L, Uematsu S, Gu Y, Shi S

PDB-9h74:
Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
Method: single particle / : Nguyen TT, Hashem Y, Rocha REO, Boissier F, Qian SB, Jia L, Uematsu S, Gu Y, Shi S

EMDB-48424:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

PDB-9mni:
CGRP Receptor in complex with dC2_050
Method: single particle / : Cao J, Cary BP, Belousoff MJ, Wootten DL

EMDB-44547:
Cryo-EM structure of Chikungunya virus asymmetric unit with Fab IM-CKV063
Method: single particle / : Su GC, Galaz-Montoya JG, Pintilie G, Jin J, Chiu W

EMDB-44423:
Cryo-EM structure of Chikungunya virus asymmetric unit with Fab C9
Method: single particle / : Su GC, Galaz-Montoya JG, Pintilie G, Jin J, Chiu W, Auguste A

EMDB-44337:
Cryo-EM structure of Chikungunya virus in complex with Fab fragment of neutralizing antibody C9
Method: single particle / : Su GC, Pintilie G, Jin J, Chiu W

EMDB-44340:
Cryo-EM structure of Chikungunya virus in complex with Fab fragment of neutralizing antibody IM-CKV063
Method: single particle / : Su GC, Galaz-Montoya JG, Pintilie G, Jin J, Chiu W

EMDB-70812:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 19, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Scapin G

EMDB-70813:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 36, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Scapin G

PDB-9osw:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 19, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Mader P, Sicheri F

PDB-9osy:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 36, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Mader P, Sicheri F

EMDB-65631:
Subtomogram average of MJ1HA S-layer
Method: subtomogram averaging / : Goto-Ito S, Yamagata A, Lee Y, Ehara H, Ito T

EMDB-65632:
Subtomogram average of MJ1 attachment organelle
Method: subtomogram averaging / : Goto-Ito S, Yamagata A, Lee Y, Ehara H, Ito T

EMDB-49092:
Structure of the Rattus norvegicus ACE2 receptor bound HsItaly2011 RBD complex
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-49093:
Eptesicus fuscus ACE2 peptidase domain bound to VsCoV-a7 RBD complex
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9n7d:
Structure of the Rattus norvegicus ACE2 receptor bound HsItaly2011 RBD complex
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9n7e:
Eptesicus fuscus ACE2 peptidase domain bound to VsCoV-a7 RBD complex
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-48344:
D24.1M01 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-48345:
A7M08 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-48346:
B25M05 Fab bound to HPV16 L1 pentamer
Method: single particle / : Hurlburt NK, Singh S, Rodarte JV, Pancera M

EMDB-62650:
A35 of MPXV in complex with mAb975
Method: single particle / : Yan RH, Yang HN

PDB-9kyz:
A35 of MPXV in complex with mAb975
Method: single particle / : Yan RH, Yang HN

EMDB-39365:
Cryo-EM structure of ADGRG2-Gs complex with NTF nanobody
Method: single particle / : Huang SM, Sheng-chao G

PDB-8ykd:
Cryo-EM structure of ADGRG2-Gs complex with NTF nanobody
Method: single particle / : Huang SM, Sheng-chao G

EMDB-61474:
Cryo-EM structure of CpAgo in complex with the 5'-P guide DNA.
Method: single particle / : Liu Y, Li S, Zhang K

EMDB-61475:
Cryo-EM structure of CpAgo_gDNA-tg_ssDNA monomeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

EMDB-61476:
Cryo-EM structure of CpAgo_gDNA-tg_ssDNA dimeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

EMDB-61485:
Cryo-EM structure of CpAgo_gDNA-tg_dsDNA monomeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

EMDB-61486:
Cryo-EM structure of CpAgo_gDNA-tg_dsDNA dimeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

EMDB-61487:
Cryo-EM structure of CpAgo_gDNA-tg_bubble_dsDNA monomeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

EMDB-61488:
Cryo-EM structure of CpAgo_gDNA-tg_bubble_dsDNA dimeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

PDB-9jh7:
Cryo-EM structure of CpAgo in complex with the 5'-P guide DNA.
Method: single particle / : Liu Y, Li S, Zhang K

PDB-9jh8:
Cryo-EM structure of CpAgo_gDNA-tg_ssDNA monomeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

PDB-9jh9:
Cryo-EM structure of CpAgo_gDNA-tg_ssDNA dimeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

PDB-9jhk:
Cryo-EM structure of CpAgo_gDNA-tg_dsDNA monomeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

PDB-9jhl:
Cryo-EM structure of CpAgo_gDNA-tg_dsDNA dimeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

PDB-9jhm:
Cryo-EM structure of CpAgo_gDNA-tg_bubble_dsDNA monomeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

PDB-9jhn:
Cryo-EM structure of CpAgo_gDNA-tg_bubble_dsDNA dimeric ternary complex
Method: single particle / : Liu Y, Li S, Zhang K

EMDB-61721:
Structure of human IVD in complex with FAD
Method: single particle / : Ju K, Xu Y, Bai F, Luan X

EMDB-61722:
Structure of human IVD in complex with FAD and butyryl-CoA
Method: single particle / : Ju K, Xu Y, Bai F, Luan X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more