[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 26,379 items for (author: so & a)

EMDB-71503:
Human DNA Polymerase Gamma-RNA-DNA Primer-Template Complex with Incoming ATP
Method: single particle / : Nayak AR, Buchel G, Temiakov D, Sarfallah A, Sokolova VO, Zamudio-Ochoa A

EMDB-76732:
Structure of a Strand-Displacement Complex of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Sokolova VO, Temiakov D, Sarfallah A, Zamudio-Ochoa A

EMDB-77233:
Raw Consensus map of the Strand-Displacement Complex of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Sokolova VO, Temiakov D

EMDB-77234:
Focused map (Catalytic Subunit) of the Strand-Displacement Complex of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Sokolova VO, Temiakov D

EMDB-77235:
Focused map (Accessory Subunit) of the Strand-Displacement Complex of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Sokolova VO, Temiakov D

PDB-12sl:
Structure of a Strand-Displacement Complex of Human Mitochondrial DNA Polymerase Gamma
Method: single particle / : Nayak AR, Sokolova VO, Temiakov D

PDB-9pck:
Human DNA Polymerase Gamma-RNA-DNA Primer-Template Complex with Incoming ATP
Method: single particle / : Nayak AR, Buchel G, Temiakov D

EMDB-56938:
DIT3 nanofibril
Method: helical / : Stoyanov N, Schmidt M, Faendrich M

PDB-28xg:
DIT3 nanofibril
Method: helical / : Stoyanov N, Schmidt M, Faendrich M

EMDB-75841:
Cryo-electron tomogram of cyanobacteria Prochlorococcus MED4
Method: electron tomography / : Parvate AD, Evans JE

EMDB-73662:
Structure of Mosaic -5 IDD NPs
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73675:
Structure of SS-L2-I53-50NP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73668:
Structure of SS-L2-FerritinNP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73671:
Structure of SS-L2-LuSNP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-59866:
Phosphorylated STING bound to adaptor protein complex 1 (processed for improved pSTING density)
Method: single particle / : Xu P, Ablasser A

EMDB-66538:
Structure of the old Killifish Ribosome (Consensus map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66539:
Structure of the old Killifish Ribosome (Small subunit focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66540:
Structure of the old Killifish Ribosome (head focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66541:
Structure of the old Killifish Ribosome (head focus-refined with partial mask)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66542:
Structure of the old Killifish Ribosome (Composite map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66543:
Structure of the old Killifish Proteasome
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66546:
Structure of the young Killifish Ribosome (Consensus map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66547:
Structure of the young Killifish Ribosome (small subunit focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66548:
Structure of the young Killifish Ribosome (head focus-refined)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66549:
Structure of the young Killifish Ribosome (head focus-refined with partial mask)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-66550:
Structure of the young Killifish Ribosome (Composite map)
Method: single particle / : Kim J, Song JJ, Kim Y

EMDB-73948:
Cryo-EM structure of Leishmania tarentolae respiratory complex III (cytochrome bc1 complex)
Method: single particle / : Liao YT, Chao L

EMDB-73966:
Cryo-EM structure of Leishmania tarentolae respiratory complex IV (cytochrome c oxidase dimer)
Method: single particle / : Liao YT, Chao L

EMDB-73974:
Cryo-EM structure of Leishmania tarentolae respiratory complex V (ATP synthase) membrane region
Method: single particle / : Liao YT, Chao L

EMDB-74030:
Cryo-EM structure of Leishmania tarentolae respiratory complex V (ATP synthase) peripheral stalk
Method: single particle / : Liao YT, Chao L

EMDB-74031:
Cryo-EM structure of Leishmania tarentolae respiratory complex V (ATP synthase) Fo monomer membrane region
Method: single particle / : Liao YT, Chao L

EMDB-78449:
Leishmania tarentolae respiratory complex V (ATP synthase) F1/central-stalk
Method: single particle / : Liao YT, Chao L

EMDB-78468:
Leishmania tarentolae respiratory complex V (ATP synthase) dimer
Method: single particle / : Liao YT, Chao L

EMDB-72943:
BG505gp140SOSIP.T332N_Q653L collected on 300 kV TFS Krios.
Method: single particle / : Atwood ED, Parsons RJ, Janowska K, Pathirage R, Sharma A, Acharya P

EMDB-72966:
BG505gp140SOSIP.T332N_Q653L collected on 100 kV Tundra with Falcon C detector
Method: single particle / : Atwood ED, Parsons RJ, Janowska K, Pathirage R, Sharma A, Acharya P

EMDB-54442:
MspA-M2 in a POPC nanodisc
Method: single particle / : Ashworth M, Bayfield OW, Noble OW, Plevin MJ, Antson AA

PDB-9s15:
MspA-M2 in a POPC nanodisc
Method: single particle / : Ashworth M, Bayfield OW, Noble OW, Plevin MJ, Antson AA

EMDB-66423:
Cryo-EM structure of spike protein within graphene reservoir sandwich
Method: single particle / : Song JL, Liu N, Wang HW

EMDB-78907:
Salmonella Flagellar Export Apparatus (FliPQR/FlhB/FlhA) in the context of the intact basal body with an asymmetric FlhA ring
Method: single particle / : Johnson S, Johnson MK, Lea SM

PDB-38lp:
Salmonella Flagellar Export Apparatus (FliPQR/FlhB/FlhA) in the context of the intact basal body with an asymmetric FlhA ring
Method: single particle / : Johnson S, Johnson MK, Lea SM

EMDB-75702:
Cryo-EM structure of the human ZNFX1 tetramer
Method: single particle / : Wang F, He Q, Li H

EMDB-75718:
Focused Cryo-EM map of a half-region of the human ZNFX1 tetramer
Method: single particle / : Wang F, He Q, Li H

EMDB-75741:
The consensus map of the human ZNFX1 tetramer
Method: single particle / : Wang F, He Q, Li H

EMDB-77032:
The consensus EM map of human ZNFX1 dimer in complex with ssRNA and ATPgS
Method: single particle / : Wang F, He Q, Li H

EMDB-77051:
Focused Cryo-EM map of a half-region of the ZNFX1 dimer in complex with ssRNA and ATPgS
Method: single particle / : Wang F, He Q, Li H

EMDB-77053:
Cryo-EM structure of human ZNFX1 dimer in complex with ssRNA and ATPgS
Method: single particle / : Wang F, He Q, Li H

EMDB-75365:
TASK-2 at pH 6.5
Method: single particle / : Docter T, Li B, Brohawn SG

EMDB-75367:
TASK-2 L127N at pH 6.5
Method: single particle / : Docter T, Li B, Brohawn SG

EMDB-75368:
TASK-2 at pH 6.5 with 100 uM Bupivacaine
Method: single particle / : Docter T, Li B, Brohawn SG

EMDB-75369:
TASK-2 K245A at pH 6.5
Method: single particle / : Docter T, Rietmeijer R, Cook ASI, Brohawn SG

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more