[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,273 items for (author: roy & a)

EMDB-77608:
Coagulation factor V DTQQ (B-domain region 811-1491 truncated, R709Q, R1545Q) in solution-phase
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

EMDB-77609:
Coagulation factor V DTQQ, membrane-bound, on Ptd-choline : Ptd-serine 75:25 vesicles
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

EMDB-77610:
Coagulation factor VIII, full-length, in solution-phase
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

EMDB-77611:
Coagulation factor VIII, full-length, membrane-bound, on Ptd-choline : Ptd-serine 75:25 vesicles
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

PDB-36ja:
Coagulation factor V DTQQ (B-domain region 811-1491 truncated, R709Q, R1545Q) in solution-phase
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

PDB-36jb:
Coagulation factor V DTQQ, membrane-bound, on Ptd-choline : Ptd-serine 75:25 vesicles
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

PDB-36jk:
Coagulation factor VIII, full-length, in solution-phase
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

PDB-36jl:
Coagulation factor VIII, full-length, membrane-bound, on Ptd-choline : Ptd-serine 75:25 vesicles
Method: single particle / : Kolyadko VN, Pumroy RA, Moiseenkova-Bell VY, Krishnaswamy S

PDB-9wqq:
Tomato Green Mottle Mosaic Virus (ToMMV) coat protein subunit
Method: helical / : Chatterjee A, Venkatasubramanian A, Mazumdar P, Singh SK, Das U, Roy A, Mandal B, Datta PP

EMDB-80619:
Tetrameric cystathionine beta-synthase of Mycobacterium tuberculosis bound to AOAA
Method: single particle / : Roy A, Polepalli S, Mondal B, Dutta S

EMDB-80629:
Tetrameric cystathionine beta-synthase of Mycobacterium tuberculosis bound to O-Benzylhydroxylamine
Method: single particle / : Polepalli S, Roy A, Mondal B, Dutta S

PDB-26fv:
Tetrameric cystathionine beta-synthase of Mycobacterium tuberculosis bound to AOAA
Method: single particle / : Roy A, Polepalli S, Mondal B, Dutta S

PDB-26ga:
Tetrameric cystathionine beta-synthase of Mycobacterium tuberculosis bound to O-Benzylhydroxylamine
Method: single particle / : Polepalli S, Roy A, Mondal B, Dutta S

EMDB-75707:
Apo human TRPV2, wild-type
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75708:
Apo human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75709:
2-APB bound human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75711:
apo rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-75712:
2-APB bound rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11hz:
Apo human TRPV2, wild-type
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ia:
Apo human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ib:
2-APB bound human TRPV2, S651H/T654D/D655N
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11id:
apo rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

PDB-11ie:
2-APB bound rat TRPV2, H651S/D654T/N655D
Method: single particle / : Pumroy RP, Rocereta JA, Moiseenkova-Bell VY

EMDB-58252:
Cryo-EM structure of Dopamine 3 receptor:Go complex bound to bitopic AB13-46A
Method: single particle / : Arroyo-Urea S, Garcia-Nafria J

PDB-31bg:
Cryo-EM structure of Dopamine 3 receptor:Go complex bound to bitopic AB13-46A
Method: single particle / : Arroyo-Urea S, Garcia-Nafria J

EMDB-63380:
Cryo-EM structure of Rhizobium etli MprF complexed with Lys-N-tRNA(Lys)
Method: single particle / : Nishimura M, Hirano H, Gill CP, Phan CNK, Gamper HB, Will A, Yamashita K, Yashiro Y, Kobayashi K, Kise Y, Kusakizako T, Itoh Y, Tomita K, Hou YM, Nishizawa T, Roy H, Nureki O

EMDB-63384:
Cryo-EM map of Rhizobium etli MprF complexed with Lys-N-tRNA(Lys) with the improved density of the anticodon stem loop of Lys-N-tRNA(Lys)
Method: single particle / : Nishimura M, Hirano H, Gill CP, Phan CNK, Gamper HB, Will A, Yamashita K, Kobayashi K, Kise Y, Kusakizako T, Itoh Y, Hou YM, Nishizawa T, Roy H, Nureki O

PDB-9ltt:
Cryo-EM structure of Rhizobium etli MprF complexed with Lys-N-tRNA(Lys)
Method: single particle / : Nishimura M, Hirano H, Gill CP, Phan CNK, Gamper HB, Will A, Yamashita K, Yashiro Y, Kobayashi K, Kise Y, Kusakizako T, Itoh Y, Tomita K, Hou YM, Nishizawa T, Roy H, Nureki O

EMDB-66225:
Amyloid-beta 40 Flemish (A21G) mutant Filaments from Human Brain
Method: helical / : Guillen-Poza PA, Yang Y, Hervas R

PDB-9wtw:
Amyloid-beta 40 Flemish (A21G) mutant Filaments from Human Brain
Method: helical / : Guillen-Poza PA, Yang Y, Hervas R

EMDB-48098:
Human FANCJ helicase bound to a fork DNA in the closed state
Method: single particle / : You Q, Li H

EMDB-48099:
Human FANCJ helicase bound to a fork DNA in the open state
Method: single particle / : You Q, Li H

PDB-9eja:
Human FANCJ helicase bound to a fork DNA in the closed state
Method: single particle / : You Q, Li H

PDB-9ejb:
Human FANCJ helicase bound to a fork DNA in the open state
Method: single particle / : You Q, Li H

EMDB-48096:
Human FANCJ helicase bound to a parallel G4 DNA
Method: single particle / : You Q, Li H

PDB-9ej9:
Human FANCJ helicase bound to a parallel G4 DNA
Method: single particle / : You Q, Li H

EMDB-75152:
Nucleosome containing an 8oxoG:A at SHL-6
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75153:
Nucleosome containing an 8oxoG:A at SHL+4
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75154:
Nucleosome containing an 8oxoG:A at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75155:
Nucleosome containing an 8oxoG:A at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75156:
Nucleosome containing an 8oxoG at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-75157:
Nucleosome containing an 8oxoG at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

PDB-10gj:
Nucleosome containing an 8oxoG:A at SHL-6
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

PDB-10gk:
Nucleosome containing an 8oxoG:A at SHL+4
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

PDB-10gl:
Nucleosome containing an 8oxoG:A at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

PDB-10gm:
Nucleosome containing an 8oxoG:A at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

PDB-10gn:
Nucleosome containing an 8oxoG at SHL+3
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

PDB-10go:
Nucleosome containing an 8oxoG at SHL+2
Method: single particle / : Vito AF, Ling JA, Freudenthal BD

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more